Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0002 |
Symbol | |
ID | 5422397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 2273 |
End bp | 3394 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640879247 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001414918 |
Protein GI | 154243960 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0861969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000929484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGTCA CCGTCGAGCG CGCCGAGCTT CTCAAATCGC TCAGCCACGT CCACCGCGTC GTCGAGCGGC GCAACACCAT TCCGATTCTC GCCAACGTGC TGATCAAGGC GGGCAAGAAC GGGCTGGAAC TGAAAGCCAC CGACCTCGAC CTGGAGGTGG TGGAGAGCGT TCCGGCCGAG ACCGGCCAGG CCGGGGCCAC CACCGTGCCC GCCCATGTGC TCTACGACAT CGTGCGCAAA CTGCCCGAGG GTGCGCAGGT GCAACTGGAG GCGGGCGGCG AGCGGGGCAC CCTCACCGTC AAGGCGTCCC GCGCCCGGTT CTCGCTGCAG ACCCTGCCCG AGGCCGACTT CCCGGACCTC GCGGCGGGCG AATTCTCCCA TACCTTCAAG GTGAAGGGCG CGGACTTCCG GCGCCTGGTG GACAAGACCC AGTTCGCCAT CTCCACCGAG GAGACGCGCT ATTACCTGAA CGGCATCTAT CTCCACGTCA CCGAGGGCGC CGGCGGCAAG TCCATGCTGC GGGCGGTGGC CACCGACGGC CACCGCCTCG CCCAGGCCGA GCTGGAGGCG CCGGCGGGCG CGGCCGGCCT GCCCGGCGTC ATCGTGCCGC GCAAGACCGT GGCCGAGATC CAAAAGCTGC TGGAGGACAA GGAGGCGGAG GCTACCGTCT CGCTCTCCAC CACCAAGATC CGGGTGCAGG TGGGCTCCAT CGTGCTCACC TCCAAGCTCA TCGACGGCAC CTTCCCTGAT TATGGAAGGG TTATTCCCCA GGGCAACGAC AAGACCCTGA TCGTGGACAA GGACGAGTTC GCCGCCGCGG TGGACCGCGT CTCCACAGTG TCCAGCGAGC GCGGGCGGGC GGTGAAGCTG TCGCTGGCCG AGGGCAAGAT GACACTCTCC GTCACCAATC CCGATTCGGG CAGCGCCACC GAGGAACTGG AGGTGGACTA CACCGCCGAG CCCCTCGATA TCGGCTTCAA CTCCCGCTAC CTGCTGGACA TCACCTCGCA GCTGGAAGGC GACACGGCTG AACTGAAGCT GGCCGACCCC GGCTCGCCCA CCCTGGTGCG CGATTCCACC AAGACGGATG CGCTCTACGT CCTCATGCCC ATGCGGGTGT GA
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Protein sequence | MKVTVERAEL LKSLSHVHRV VERRNTIPIL ANVLIKAGKN GLELKATDLD LEVVESVPAE TGQAGATTVP AHVLYDIVRK LPEGAQVQLE AGGERGTLTV KASRARFSLQ TLPEADFPDL AAGEFSHTFK VKGADFRRLV DKTQFAISTE ETRYYLNGIY LHVTEGAGGK SMLRAVATDG HRLAQAELEA PAGAAGLPGV IVPRKTVAEI QKLLEDKEAE ATVSLSTTKI RVQVGSIVLT SKLIDGTFPD YGRVIPQGND KTLIVDKDEF AAAVDRVSTV SSERGRAVKL SLAEGKMTLS VTNPDSGSAT EELEVDYTAE PLDIGFNSRY LLDITSQLEG DTAELKLADP GSPTLVRDST KTDALYVLMP MRV
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