Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3661 |
Symbol | |
ID | 5456763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3913947 |
End bp | 3914723 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879245 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001414916 |
Protein GI | 154254092 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.57083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 9.492269999999999e-21 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCTACC AGAACCTTCT GGTCGAAAAG AAAGGCGCGG TCGGCGTCAT AACGCTCAAT CGCCCGGACG CGCTCAACGC GCTCAACAAG GCCCTGATGG ATGAAATGAC CTTGGCGCTC GACGATTACG AAGCGGATGA TGACATCCAC TGCATCGTCA TCACCGGCTC TGCAAAGGCT TTCGCCGCCG GCGCGGACAT CAAGGAGATG CAGCCGAAAT CCTATATGGA TGTCTACAAG GAAGACTTCA TCACCGCGAA TTGGGAGCGC GCCACGCGCT GCCGCAAACC GGTCATTGCC GCCGTCGCGG GTTATGCGCT GGGAGGCGGC TGCGAGCTAG CCATGATGTG CGATTTCATC ATCGCCGCCG ACACGGCGAA ATTCGGCCAG CCTGAAATCA AGCTCGGTGT CATGCCGGGC GCCGGCGGCA GCCAGCGTCT TACCCGCTTC GTCGGCAAGT CGAAGGCGAT GGAAATGTGC CTCACCGGCC GCATGATGGA CGCGGCGGAG GCGGAGCGGT CCGGTCTCGT CAGCCGCGTC GTGCCCGCGG GCGAGCTTAT GGACGAGGTG CTGAAGGTCG CGCAGACCGT CGCGGACATG TCGCTTCCCA TCGCCATGAT GACGAAGGAA AGCGTCAACC GCGCTTACGA AACCACCCTT TCGGAGGGTG TTCGCTTCGA GCGCCGCCTG TTCCATTCCA TGTTCGCGAC CGAGGATCAG ACCGAGGGCA TGGCGGCCTT TGTCGAAAAG CGGCAGCCCC AGTTCCGTCA CCGCTGA
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Protein sequence | MAYQNLLVEK KGAVGVITLN RPDALNALNK ALMDEMTLAL DDYEADDDIH CIVITGSAKA FAAGADIKEM QPKSYMDVYK EDFITANWER ATRCRKPVIA AVAGYALGGG CELAMMCDFI IAADTAKFGQ PEIKLGVMPG AGGSQRLTRF VGKSKAMEMC LTGRMMDAAE AERSGLVSRV VPAGELMDEV LKVAQTVADM SLPIAMMTKE SVNRAYETTL SEGVRFERRL FHSMFATEDQ TEGMAAFVEK RQPQFRHR
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