Gene Plav_3656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3656 
Symbol 
ID5456979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3908728 
End bp3909972 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content64% 
IMG OID640879240 
Productphosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 
Protein accessionYP_001414911 
Protein GI154254087 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.6295e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGCGAGA GCATCCTGAC CGGCAGGCGC GTGCTGCTGA TTATCGGCGG CGGCATCGCG 
GCCTACAAGA GCCTGGAATT GATCCGCAGG CTCAAGGAGC GCGGCGCCAG CGTGCGAGGT
GTGATGACGC AGGCGGCGCA TGAATTTGTG ACGCCGCTTT CGGTGTCGAG CCTGACGGGC
GACAAGGTCT ATACCGATCT CTTCAGCCTG ACCGACGAAG CGGAGATGGG GCACATCGAA
TTGTCGCGCG ACGCGGACCT GCTGGTGGTC GCGCCCGCAA CCGCCGACCT GATGGCGAAG
ATGGCGAATG GCATCGCCAA CGATCTCGCG AGCACCGCGC TTCTCGCCAC CGACAAGAAA
GTGCTGATCG CGCCGGCGAT GAATGTGCGG ATGTGGACAC ATCGCGCGAC GCAGCGGAAC
TTCGAAACGC TGCTGGCGGA CGGCGTCGAT TTCGTCGGAC CGAATGAAGG CGACATGGCC
TGCGGCGAAT ACGGGCCCGG ACGTATGGCG GAGCCGGCGG AAATTCTCGC GGCCATCGAA
GCGCATTTCG CGGAGCTTGC CTATCCCGGC GGCGGACCGC TGAAAGGCAA ACGCATTCTC
ATTACATCGG GGCCGACGCA TGAGCCGATC GACCCGGTGC GCTATCTAGC CAATCGCTCT
TCCGGCAAGC AGGGCTATGC GATCGCGCAG GCCGCCGCGC GGCTTGGCGC GGAAGTGATA
CTTGTTTCCG GCCCGACAAA CCTGCCCGCA CCGCCCGGCG TGACCTTGAA GCGCGTGGAG
ACGGCGCGCG AAATGCTGAG CGCCTGCGAG GCGTCGCTCC CCGCCGACAT TGCGATTTGC
GCGGCTGCGG TTGCCGACTG GCGGGTGGCG ACAGATGCCG AGCAGAAGCT GAAGAAGCAG
CCGGGCGAGG CGGCGCCGGC AATCATGCTG GTCGAGAACC CCGACATTCT GGCGACGCTT
TCCCATTTGC AGAAGAACCG CCCTGCCCTC GTTGTCGGCT TTGCCGCCGA AACGGAAAAG
GTGATCGAGC ACGCGACATC GAAACGGCAA CGCAAGGGCT GCGACTGGAT CGTCGCGAAC
GACGTGTCGC CCGCGACCGG CGTGATGGGC GGCGATCTCA ACACCGTGCA TCTCATCACC
GCGAGCGGCA AGGAAGACTG GCCGCTGCTG CCGAAACAGG CCGTGGCCGA ACGTCTCGTG
CGGCGCATCG CCGATCATTT CTCTCCAGCA AAGGCTGCCG AATGA
 
Protein sequence
MSESILTGRR VLLIIGGGIA AYKSLELIRR LKERGASVRG VMTQAAHEFV TPLSVSSLTG 
DKVYTDLFSL TDEAEMGHIE LSRDADLLVV APATADLMAK MANGIANDLA STALLATDKK
VLIAPAMNVR MWTHRATQRN FETLLADGVD FVGPNEGDMA CGEYGPGRMA EPAEILAAIE
AHFAELAYPG GGPLKGKRIL ITSGPTHEPI DPVRYLANRS SGKQGYAIAQ AAARLGAEVI
LVSGPTNLPA PPGVTLKRVE TAREMLSACE ASLPADIAIC AAAVADWRVA TDAEQKLKKQ
PGEAAPAIML VENPDILATL SHLQKNRPAL VVGFAAETEK VIEHATSKRQ RKGCDWIVAN
DVSPATGVMG GDLNTVHLIT ASGKEDWPLL PKQAVAERLV RRIADHFSPA KAAE