| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3646 |
|---|
| Symbol | |
|---|
| ID | 5455471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3901769 |
|---|
| End bp | 3902572 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640879230 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001414901 |
|---|
| Protein GI | 154254077 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.90233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000000000838501 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA GCGACGACCA ACTGGAACGC TATGCGCGGC ACATCGTGCT GAAGGAGATC
GGCGGGCCCG GCCAGCAGAA ACTCCTGAAG GCGCGGGTGC TCATCATCGG CGCGGGCGGG
CTTGGGAGCC CTTGCCTCAT GTATCTCGCG GCAGCGGGCG CCGGCACTAT CGGCATCATC
GACAATGACA CCGTGTCGCT TTCCAATTTG CAGCGGCAGA TCGCGCATGG GACGGGCGAT
CTCGGCCGGG CGAAGACGGA GAGCGCGGGC GATGCGGCGC GACGCATCAA CCCGGATGTG
AAGATCGTTC AGCACAAGGA GCGGCTGACG GGCGCCAATG CGCTGGAGAT CGTTTCGCAA
TACGACATTG TTGCGGATGG CTGCGATAAT TTTGCGACGC GGTTTCTGGT GAACGATGCC
TGCTACTTCG CGAAGGTGCC GCTGGTCTCT GCCGCTGTCG GTCAGTTCGA GGGACAGGTG
GCGACGTTCC GCGCCTTCGA ACGCGACGGC GAGGGCAAGC CGAAGCCGAA TTACCGCGAC
TTCGTGGGCG CGACGCCGCC GCCCGGCTCT GTCCCCACCT GCGAGGAGGC GGGGGTGCTT
GGCGCGCTGA CGGGCGTTGT CGGGTCGCTG CAGGCGCTCG AAGTCATCAA GGAGATTACC
GGCGCGGGGG AGAGCCTTGC GGGGAAGCTG CTGATCTATG ACGCGCTCGA CACACGGTTC
CGCACCGTGA AGCTCAAATG GGACCCGAAG AACGCGCTGA CGGGGGAGAG CCCGACGATC
ACGGATTTGA GCGGGCACGC CTGA
|
|---|
| Protein sequence | MKLSDDQLER YARHIVLKEI GGPGQQKLLK ARVLIIGAGG LGSPCLMYLA AAGAGTIGII
DNDTVSLSNL QRQIAHGTGD LGRAKTESAG DAARRINPDV KIVQHKERLT GANALEIVSQ
YDIVADGCDN FATRFLVNDA CYFAKVPLVS AAVGQFEGQV ATFRAFERDG EGKPKPNYRD
FVGATPPPGS VPTCEEAGVL GALTGVVGSL QALEVIKEIT GAGESLAGKL LIYDALDTRF
RTVKLKWDPK NALTGESPTI TDLSGHA
|
|---|
| |