| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3643 |
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| Symbol | |
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| ID | 5456969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3899882 |
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| End bp | 3900874 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879227 |
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| Product | glyoxylate reductase |
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| Protein accession | YP_001414898 |
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| Protein GI | 154254074 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000000307425 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCCA AAAAACCGCT CGTCATCGTC ACCCGCAAAT TGCCTGCGCC CATCGAGGCG
CGGATGGGCG AGCTGTTCGA TGTCCGGCTG AACGGCGATG ATCACCCCTT TTCCGCGGCC
GAGCTTGCGG CTGCGATCCG CGAGGCCGAT GTCCTGGTCC CCACCGTGAC GGACCGGATA
GATGCCCGCC TCCTCTCCCA GGCCGGCGAA AATCTCCGCC TCATCGCCCA GTTCGGCACC
GGCGTCGACA ATATCGACGT CGAGACGGCC CGCCGCCGCG GCATCACCGT CACCAACACG
CCGGGCGTGC TGACGGAAGA CACCGCCGAC ATGACCATGG GCCTGCTGCT GGCCGTGCCG
CGCCGCCTCG CCGAAGGCTC CCGCTATCTC CGCGAGCATG AAGGCCAATG GCCCGGCTGG
TCGCCCACCT GGATGCTCGG CCGCCGGCTC ACCGGCAAGC GCCTCGGCAT CATCGGCATG
GGCCGCATCG GCCAGGCGGT GGCGCGCCGC GCCAAACCCT TCGGCCTCGA AATCCACTAC
CACAACAGAA AGCCCGCCAA CGCCGTCATC GAGCAGGAGC TCGAAGCGCG TTTCTGGGAA
AATCTCGACG ACATGCTGCC CAAGGTCGAT ATCGTCTCGG TCAATTGCCC GCTGACGCCG
CAGACCTTCC ACCTGCTCGA CACGCGCCGC CTGAAACTGC TGAAACCGGA AGCCTATATC
GTCAACACCG CGCGCGGCGA AATCATCGAC GAGAACGCGC TCATCCGCGC GCTGGAAGCC
GGCGAGCTCG CCGGCGCCGG CCTCGACGTC TTCGAGCATG AGCCGACGGT GAACCCGCGC
CTGCTGAAAC TCCCCAACGT CGTCTCGCTC CCCCACATGG GCTCCGCCAC CATCGAAGGC
CGCGTCGAAA TGGGCGGCAA GGTCATCGTC AACATCAAGA CCTTCATGGA CGGCCACCGC
CCCCCCGACC GCGTCATCCC CGCGATCATG TAA
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| Protein sequence | MTAKKPLVIV TRKLPAPIEA RMGELFDVRL NGDDHPFSAA ELAAAIREAD VLVPTVTDRI
DARLLSQAGE NLRLIAQFGT GVDNIDVETA RRRGITVTNT PGVLTEDTAD MTMGLLLAVP
RRLAEGSRYL REHEGQWPGW SPTWMLGRRL TGKRLGIIGM GRIGQAVARR AKPFGLEIHY
HNRKPANAVI EQELEARFWE NLDDMLPKVD IVSVNCPLTP QTFHLLDTRR LKLLKPEAYI
VNTARGEIID ENALIRALEA GELAGAGLDV FEHEPTVNPR LLKLPNVVSL PHMGSATIEG
RVEMGGKVIV NIKTFMDGHR PPDRVIPAIM
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