Gene Plav_3637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3637 
Symbol 
ID5454583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3894492 
End bp3894923 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content65% 
IMG OID640879221 
Productferric uptake regulator family protein 
Protein accessionYP_001414892 
Protein GI154254068 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0000386117 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGGTGA CGCAGGAACG CCCCTACGCA CAGACACTGA CCAGGCTGCG GGAAGCAGGG 
CTCCGCCCCA CGCGCCAGCG GCTGGCTCTG GGCCGCATCT TGTTCGATGG CGGTGATCGC
CATGTCACGG CCGAAGCCCT CCATGAGGAA GCGCAGAAGG CCGGCGTCAG CGTTTCCCTC
GCCACGGTCT ACAACACGCT GCACCAGTTC ACCGGCGCGG GCCTCCTGCG CGAAGTGGTG
GTGGACAGCG CGCGGACCTA TTTCGACACC AATATCGACG ACCACCATCA CTTCTTCATC
GAGAAGGATG GCGCGCTGAT GGATATTGCG GGCACCGATG TCACCATCGG CAAGCTCCCG
GCCGCGCCGG AAGGCATGGA CATCGCCCGC GTCGATGTCA TCGTCCGCCT GCATGACCGG
CCCAAAGGCT GA
 
Protein sequence
MLVTQERPYA QTLTRLREAG LRPTRQRLAL GRILFDGGDR HVTAEALHEE AQKAGVSVSL 
ATVYNTLHQF TGAGLLREVV VDSARTYFDT NIDDHHHFFI EKDGALMDIA GTDVTIGKLP
AAPEGMDIAR VDVIVRLHDR PKG