Gene Plav_3629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3629 
Symbol 
ID5453496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3886606 
End bp3887028 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content64% 
IMG OID640879213 
Productribosome-binding factor A 
Protein accessionYP_001414884 
Protein GI154254060 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.445652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.0497582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAGA AATCGAGTTC AAAGAGCCAT CGCGCCACGC GCGGTCCCAG CCAGCGTCAG 
CTCCGCGCGG GCGAGCTCAT TCGCCGTGCG CTGTCCGATG TCGTCACCCG CGGCACCATT
CAGGACCCGG ACCTGATCGA ACGCAGTTTC TCCGTCACCG AAGTGCGCGT CAGCCCCGAC
CTTCGCCACG CCACCTGTTT CGTCGCGCCG CTGGGCAAGG GCGATGCTGC GGCTCTTGCC
GCCGCGCTCA CCCGCGTGCG CGGCTATCTG CGCGGTCAGC TCTCGAAGGA AGTCACCTTC
AAATACATGC CCGATCTCAC CTTCGAGCCC GATACCTCCT TCGACAAGGC GGAGCAGATC
GACCGTCTGC TGCATTCGCC GAAGGTCTCG CAGGATCTCT CGCCCCAGGA CGACGAGGAA
TAG
 
Protein sequence
MQKKSSSKSH RATRGPSQRQ LRAGELIRRA LSDVVTRGTI QDPDLIERSF SVTEVRVSPD 
LRHATCFVAP LGKGDAAALA AALTRVRGYL RGQLSKEVTF KYMPDLTFEP DTSFDKAEQI
DRLLHSPKVS QDLSPQDDEE