| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3628 |
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| Symbol | |
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| ID | 5455820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3883880 |
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| End bp | 3886543 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879212 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001414883 |
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| Protein GI | 154254059 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.206324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC AGGCCGATAC GAGCGAACGC AAACCGAAAG CCGCAGGCAA GACGTTGAGC
CTCAAGCGGA CGGTGGAATC TGGCCATGTG CGCCAGAATT TCTCGCATGG CCGCTCGAAG
TCGGTCGTCG TCGAGAAAAA GAAGAAGCGC ACGCTGAAGA CCTCGGCGGA TGCCGCACCG
GCCGCCGCGC CTGCCGCTGC TCCCGCAGCA GCCGAAGAGG TCGCGAAAAA GCCGGTTGCC
GCGCCTGAGG TAAAGCCCGC CGCTCCGGTC GAGGAAAGGC CGGCACCCGT CGCCAAGGCC
GCGCCTGAAG TCAAGGCAGT GCCCGCCCCG GCTCCGGCCG CCGCGCCTGC CGTGGAAAAG
AAGCCGAGCC GTTCGCGCTC CGGCGTCGTC CTTCGCACGC TCACCGAAGA AGAAAAAAAC
GCCCGTGCCC AGGCGCTCGA CAGCGCGCGC GAACGTGAAG GCGAGGATCG CCGGCGCGCC
GAGGAAGAAG CCAGGCGCTT CGCCGAGGAA GATGCCCGCC GCGAAGCAGA GCGTGCCGCC
GCGGCCGCGC GCGCCGCCGA GGAAGCCTCG CGTCACACCG CCGATCAGTC CACGCGGACC
CGCGCCGCCG AGGAAGCCAA GCGCCGCCTC GACGATGACC GGCCCGCCGC CACGCCTGCG
GCCGCCCGCC CCGCCAAGGA GCAGGCGATC GAGGAAGACG ACGATAAGCC GAAGCGCGGC
GCCGGCCACA CGCCCGCCAA GGCGCCGCCT GCGCGCCGCA GCGAAGAACG CCGTCGCGGC
AAGCTCACCA TCACCAAGGC TTTCGACGAC GAGAGCGAGC GCCAGCGTTC GCTCGCTTCG
ATGCGCCGCC GCGTGGAGCG CGAGCGCAAG AAGCACATGG GCATTCAGGA AGCCCCGCAG
AAAATCATCC GTGAAGTCGT CATTCCGGAA GTCATCACCA TTCAGGAACT CGCGAACCGC
ATGGCGGAGC GCGCAGTCGA TGTGATGAAG ATCCTGATGA AGCAGGGCAT CATGCTGAAG
ATCACCGATG TGATCGACAG CGACACCGCC CAGCTCGTCG CCGAAGAACT CGGCCACACC
GTGAAGCGCG TTGCGGAATC GGACGTTGAG GAAGGCCTCG TCGGCGAAGC CGATATCGAA
GAGGCGAAGC AGGCGCGCGC GCCCGTCGTC ACGGTCATGG GCCATGTCGA CCACGGCAAG
ACCTCGCTGC TCGACGCGCT ACGCAAGACC GACGTCGCGG CCGGCGAAGC GGGCGGCATC
ACGCAGCATA TCGGCGCCTA TCAGGTAAAC CTGAGCTCGG GCGAGCGCAT CACCTTCCTC
GATACGCCGG GCCACGCCGC CTTCACCTCG ATGCGCGCCC GTGGCGCCAA GGTGACGGAC
ATCGTCGTGC TCGTCGTCGC GGCGGATGAC GGCGTCATGC CGCAGACCAT CGAAGCGATC
AATCACGCGA AGGCCGCGGG CGTTCCGATG ATCGTCGCCA TCAACAAGAT GGACAAGCCG
GAAGCCGATC CGACCCGCGT GAAGAACGAA TTGCTGCAGC ACGAAGTCGT GGTCGAGGAT
TTCGGCGGCG ACGTCCTCAC CGTGCCGATC TCCGCCAAGA CGGGCATGGG CCTCGACAAG
CTCGAGGAAA CCATTCTCCT CCAGGCCGAA CTGCTCGACA TCCGTGCCAA TCCCGATCGT
GCCGCCGAAG GCATCATCGT CGAGGCGAAG CTCGATCGCG GCCGTGGCCC GGTCGGCACC
GTGCTCGTTC AGCGCGGCAC GCTGAAAGTC GGCGACATCA TCGTGGCCGG CGCCGAATGG
GGCCGTGTCC GCGCGCTCAT CAATGATCGC GGCGAAAATG TCGAAAGCGC CGGTCCCTCC
GTGCCCGTCG AAGTGCTTGG CCTCGGCGGC GCGCCGGAAG CGGGCGACGT CATCAGTGTG
GTCGAGAGCG AAGGCCGCGC CCGCGAAGTT ACGGCCTATC GCCAGCGTCT CCAGCGCGAC
AAGCGCGTCG GCACCGGCGG GCGCACCTCG CTCGACCAGA TGCTCTCGCA GCTGAAGGAA
CAGGACAAGA AAGAGCTGCC GATCGTCGTC AAGGCGGACG TGCAGGGTTC CGCCGAAGCG
ATCGTGCAGG CGCTTGAAAA GCTCGGCACC GACGAAGTCA CCGCCCGTGT CCTTCATGTC
GGCGTCGGCG GCGTCACGGA ATCGGATGTC ACGCTGGCGA CCGCCTCGCG CGCGCCGATC
ATCGGCTTCA ACGTCCGCGC CAATACGCAG GCGCGCGATG CCGCGCGTCA GGCCGGCGTC
GAAATCCGCT ACTACTCGGT CATCTACGAC CTCGTGGACG ACATCAAGGC CGCCATGTCC
GGCATGCTTT CGCCGGAGCT GCGCGAAACC TTCCTCGGCA ATGCCGAAAT CCTGGAAATC
TTCAACATTT CCAAGACCGG CAAGGTCGCG GGCTGCCGCG TCACCGAAGG TGTCGTGCGC
CGCGGTTCGC ATGTCCGCCT CATCCGCGAC GACGTGGTGA TCCACGAAGG CAAGCTCTCC
ACCTTGAAGC GCTTCAAGGA TGAAGTGAAG GAAGTGCAGT CCGGTCAGGA ATGCGGCATG
GCTTTCGAGG GCTACCAGGA TATGCGCAAG GGCGACGTCA TCGAATGTTT CGATGTCGAG
GTCGTGCAGC GCAGCCTCGC CTGA
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| Protein sequence | MTDQADTSER KPKAAGKTLS LKRTVESGHV RQNFSHGRSK SVVVEKKKKR TLKTSADAAP
AAAPAAAPAA AEEVAKKPVA APEVKPAAPV EERPAPVAKA APEVKAVPAP APAAAPAVEK
KPSRSRSGVV LRTLTEEEKN ARAQALDSAR EREGEDRRRA EEEARRFAEE DARREAERAA
AAARAAEEAS RHTADQSTRT RAAEEAKRRL DDDRPAATPA AARPAKEQAI EEDDDKPKRG
AGHTPAKAPP ARRSEERRRG KLTITKAFDD ESERQRSLAS MRRRVERERK KHMGIQEAPQ
KIIREVVIPE VITIQELANR MAERAVDVMK ILMKQGIMLK ITDVIDSDTA QLVAEELGHT
VKRVAESDVE EGLVGEADIE EAKQARAPVV TVMGHVDHGK TSLLDALRKT DVAAGEAGGI
TQHIGAYQVN LSSGERITFL DTPGHAAFTS MRARGAKVTD IVVLVVAADD GVMPQTIEAI
NHAKAAGVPM IVAINKMDKP EADPTRVKNE LLQHEVVVED FGGDVLTVPI SAKTGMGLDK
LEETILLQAE LLDIRANPDR AAEGIIVEAK LDRGRGPVGT VLVQRGTLKV GDIIVAGAEW
GRVRALINDR GENVESAGPS VPVEVLGLGG APEAGDVISV VESEGRAREV TAYRQRLQRD
KRVGTGGRTS LDQMLSQLKE QDKKELPIVV KADVQGSAEA IVQALEKLGT DEVTARVLHV
GVGGVTESDV TLATASRAPI IGFNVRANTQ ARDAARQAGV EIRYYSVIYD LVDDIKAAMS
GMLSPELRET FLGNAEILEI FNISKTGKVA GCRVTEGVVR RGSHVRLIRD DVVIHEGKLS
TLKRFKDEVK EVQSGQECGM AFEGYQDMRK GDVIECFDVE VVQRSLA
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