| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3616 |
|---|
| Symbol | |
|---|
| ID | 5454954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3871395 |
|---|
| End bp | 3872261 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640879200 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001414871 |
|---|
| Protein GI | 154254047 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCG CGCGGGCGGC TGTACTGCTG ACGGGCTTTA TTCTTTCCGC CGTCCTGCTC
ATGCCTCTGC AATGGCTTGG CCTGAAGCTG CGCCTGCCTT ATGCGCGTGC GCTGCCGAAT
CGCTATCACC GCTTTCTTTG CCGCCTGATC GGCATCCATG TCACGACGCG CGGCATGCCG
CATGAAGGCA GTGCCTGCCT CGTGGCGGCA AACCACACAT CCTGGCTCGA CATCCCCATT
CTTGCCTCGC TCCAGCCCTG CTCATTCGTC GCGAAAAGCG AGGTCGCCGC CTGGCCCTTT
TTCGGTACGC TGGCCCGGCT GCAGCGGACG GTCTTCGTGG AGCGCGAACG GCGCACCCGC
ACCGCTCACT CGCGCAACGA GATCCATGCC CGGATCGCGG CCGGCGATCG CCTGGTACTG
TTCCCGGAAG GCACATCGAG CGATGGCAAC AGGGTTCTCT CCTTCAAAAG CGCCCTGATG
AGCGTCGCCC AACTCACCAT CGTCAATGGC GACGAGGACC GCGAGGACGA TCTCGTCGTC
CAGCCAGTCT CAGTCGCCTA TACGAAGCTT CATGGCATGC CGATGGGGCG CTATTTCCGG
CCCTTCTTCG CCTGGTATGG CGATATGGAA CTTTTTCCTC ATCTCTGGGA GGCCTTCCGT
CTCGGCCCCA TAGAAGTGAC GGTCGAGTAT CACAGGCCGG TCACGATCCG CCAGATCGGC
AACCGGAAGG CACTCGCACT CTATTGTGAG GAATGCTGCC GCCGCGGCGT CTCGCAGGCC
CTTATCGGTC GCTGGGACGA GGCCGCGCCC ACGCCGCCGC TCGCCGAAAG CGGCAGCTTC
GCCGCACCTC GCGCCGCCGG TGCCTGA
|
|---|
| Protein sequence | MATARAAVLL TGFILSAVLL MPLQWLGLKL RLPYARALPN RYHRFLCRLI GIHVTTRGMP
HEGSACLVAA NHTSWLDIPI LASLQPCSFV AKSEVAAWPF FGTLARLQRT VFVERERRTR
TAHSRNEIHA RIAAGDRLVL FPEGTSSDGN RVLSFKSALM SVAQLTIVNG DEDREDDLVV
QPVSVAYTKL HGMPMGRYFR PFFAWYGDME LFPHLWEAFR LGPIEVTVEY HRPVTIRQIG
NRKALALYCE ECCRRGVSQA LIGRWDEAAP TPPLAESGSF AAPRAAGA
|
|---|
| |