Gene Plav_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3615 
Symbol 
ID5454283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3870848 
End bp3871354 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content58% 
IMG OID640879199 
Productferric uptake regulator family protein 
Protein accessionYP_001414870 
Protein GI154254046 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGG CAATGACAGA CAAGACAACA ACAGCCACCG CCCTGCATTC CGACGCTGCG 
GATAACGATC CCGAGAGGAT CGAAAATCTC TGCGTGGAAA AAGGCATGCG TATGACCGAC
CAGCGCCGCG TGATCGCGCG TGTGCTCTCC GTTGCGCATG ACCATCCGGA TGTGGAGGAG
GTCTATCGCC GCGCCGCTGC CGTCGACAGC AAGATTTCGA TCGCGACCGT CTATCGCACG
GTCCGGCTGT TCGAAGAGGC AGGCATTCTC GAACGCCATG ATTTCCGCGA TGGCCGCTCG
CGCTACGAGC AGGTGCCGGA AGAGCATCAC GATCACCTGA TCGATCTTCA GACAGGAACG
GTCATCGAAT TTCACAACGA TGAAATCGAA CGGCTGCAGC AGATCATCGC CAGAGAGCTC
GGCTTCGAAC TTGTCGACCA TCGGCTTGAG CTTTACGGCC TGCCGCTCGA CCGCAACAAG
AAGCCGGACG GCAAGAGCAA GGGATGA
 
Protein sequence
MMRAMTDKTT TATALHSDAA DNDPERIENL CVEKGMRMTD QRRVIARVLS VAHDHPDVEE 
VYRRAAAVDS KISIATVYRT VRLFEEAGIL ERHDFRDGRS RYEQVPEEHH DHLIDLQTGT
VIEFHNDEIE RLQQIIAREL GFELVDHRLE LYGLPLDRNK KPDGKSKG