| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3610 |
|---|
| Symbol | |
|---|
| ID | 5454515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3867703 |
|---|
| End bp | 3868209 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640879194 |
|---|
| Product | UspA domain-containing protein |
|---|
| Protein accession | YP_001414865 |
|---|
| Protein GI | 154254041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAT CCGAAACACC GAGCCGCCCC GTCGCCCCGC CGAAAAGGCG CAAGTTTCTC
GTCGTCGTTG ACGGCACACC TGAATCCGAG GTCGCGCTCC ATTTCGCAAG TCTCCGCGCC
AGCCACACAA GCGGCGTCGT CACGCTGCTC GCCGTCATCG AGCCGGGCGA GGCTTCGCAG
CAATGGCTCG GCGTTCAGAA CATCATGAAG GAAGAAGCGC GCGAGGAGGC GGAAGAGCTG
CTCCACAGGC TTGCCGCGCA TGTGAACGAA TATGCCGGCA TCATGCCCGA ACTGGTCATC
CGCGAAGGGC GCCGCGCCGA GCAGGTGATG CAGTTGATCG CCGAAGACAA GGATATCGCG
ATCCTCGTCC TCGCTGCCGG TCTCGGCAAG GAAGGGCCCG GCCCTCTCGT AACCATGGTC
GCGAGCGCCA GCGAAAAGGC CTTCCCGATC CCCGTCACCG TCGTGCCCGG TAACCTCACC
GAGGAAGCGA TCCGCACGCT GGCTTGA
|
|---|
| Protein sequence | MSESETPSRP VAPPKRRKFL VVVDGTPESE VALHFASLRA SHTSGVVTLL AVIEPGEASQ
QWLGVQNIMK EEAREEAEEL LHRLAAHVNE YAGIMPELVI REGRRAEQVM QLIAEDKDIA
ILVLAAGLGK EGPGPLVTMV ASASEKAFPI PVTVVPGNLT EEAIRTLA
|
|---|
| |