| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3595 |
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| Symbol | |
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| ID | 5455148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3841650 |
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| End bp | 3843884 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879179 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001414850 |
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| Protein GI | 154254026 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGC TCCCTGTCGA CCAGGCGCCC TTCTATCTGC TGGGCCTCGC CATCGTTCTC
ATCCTCGGCA TCGAAGCCTG GCGCCGTGCC TCCGCGCGCG CCCGCGCCCA TATGGCCGAG
ATCGAAACGC TGCATGCCCG CATCGAAACG CTTCGCGACG AGAAATGGGA AATCGCCGAG
CGCGAGGAGC GATACCGCGA TCTCGTGCGC GCGCAGGGCG ACGTCATCAT CCGCAAGGAT
CTGCGCGGCC GCCTCACTTA TGTGAACGAC GTCTTCTGCG ACACTTTCGG CAAGCTCCGC
ACAGACGTCA TCGGCCGCAC CTTCGTGCCG GACCTGCCGG AAGGCGAGCG TCCGCGCATG
CTGGCAAGTT TCTCCGGCCT CTCCATGCCG CCCTATCGCA TCCGCTACGA CGAACGGACG
CTGACGGCGC GCGGCGCCCG CTGCATCGCC TGGGAAGAAT TCGCGATCCG CGACGAAGAC
GGCAAGCTGG TGGAAATCCA GGCCGTCGGC CGCGACGTGA CCGACCGCAA GGACGCGGAG
GAAAAACTCG CCATCGCCCT CGAACAGGCA AAGGAGGCGA ACCGCGCCAA GTCGCTCTTC
CTCGCCACCA TGAGCCATGA AATCCGCACG CCCATGAACG GCGTCATCGG CATGACGAAG
CTGCTCCTCG ACACGAAGCT CGATCCCGCC CAGCGTTCCT ATGCCGAGGC CGTGCGCGCA
TCTGGCGAGG CGCTCTTGAA CATCATCAAC GACATTCTCG ACTATTCGAA AATCGAAGCC
GGCAAGGTCA CGCTCGATGA AGCCGCCTTC GATCCGCGCA ACGTCCTCGA AAGCGTCGCC
GAGCTTCTTG CGCCGCGTGC CTTCGACAAG GGCCTCGAAA TCGTCACCGA AATTTCGCCC
TCCGTGCCGC GCATGCTGAT GGGCGATGAA GCCCGCATCC GCCAGATATT GCTCAACCTC
GCGGGCAACG CCATCAAGTT CACGGGCAGG GGTGGCGTCG CGCTGCGTCT CCTGCGCGAG
GAAACCTCGC CGGCCGGCAG GCGCATCGAC GGAAAGAGAG AAGGCCGCAT CGGTCTCATC
CTCGAAGTCG AGGATACCGG CATCGGCATG GACGAACAGG CGCGCGAACA TATCTTCGAC
GATTTTGCGC AGGCCGATCA GTCTCATGCG CGCCGTTATG AAGGCACCGG CCTCGGCCTC
GCCATCACGA AGCGTCTCGT CGGCGCAATG GAAGGCCGCA TCGAGGTGGA GAGCGAGGAG
GGCAGGGGCT CCGTCTTCCG CGCCCATCTG CCGCTCCGCC TCGCGCTTGG CGAGCATGAC
GGCCCCGCGC CCGAACCGCT CGCCGGTCTC AGCGTCGTCA TCCTCAACGA TCCGCCGCTT
GTCGGTGCGG CGCTCGCCCG CGCAGCATCG GCCGCCGGCG CGGATACATA TCTTGCCGCT
GACCGGGAGG CGCTTATCCG CGCGCTCGAT GCGTCCCCCT ACGATATTTT CATCTGCCCC
CTCGACGGCA TCGCCGGTGA TGGCGCGGCC CTCGCCGCTC ATGCGCGTGG CCGCCAGCCC
GGCCTCGCCA CCCTCATGTT GCTCCGCCCG CAGGATCGCG GCCGGCTGGC GGCACTCACC
GCCGGTCCCG ATGCGCCCTT CGACGGCTAT CTCATCCGTC CCGTTCGCGC CGCCTCGCTC
ATCGCGCGCC TCACCGCGCT CCGCGTGCGC CACTGGATGC CGGATGTCGG CGCGCCCCAC
ACGCATGATT ATGACGATGA GGTGGTGGAC GAGGAGATGA TGCCGCCCCG CGTCCCCGTC
ATCGGCATTC CCCCGCTCAA TGTGCTCGTC GCGGAGGATA ACGAGATCAA CGCCCTCCTC
ACCCGCACGC TGCTCGAACA TACCGGCCAC ACCGTCCGCC TCGCCCGCGA CGGCGCGGAA
GCGGTCGCCG CGCTGGAGGC CGATACCGGC GGCAAGATCG ACCTCGTGCT GATGGACCTT
CACATGCCGG GCATGGATGG TTTCACCGCC ACCGCCCGCA TCCGCGATCT CGAAATGCCG
CATGCCGCCC TCCCGATCAT CGCCCTCACC GCCAATGCGA TGGCGGATGA CCGTCAGGCC
TGTCTCGATG CCGGCATGGA CGACTACCTC TCCAAGCCCG TGGCGGCGGA AGAGCTGGGC
GCGGCGCTGG CGCGCTGGGC GGGCCGCCGT TCGCCGCTGA AGGCCGCCTC TGGCGAAAAG
GCGAATCGCG CCTAA
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| Protein sequence | MLTLPVDQAP FYLLGLAIVL ILGIEAWRRA SARARAHMAE IETLHARIET LRDEKWEIAE
REERYRDLVR AQGDVIIRKD LRGRLTYVND VFCDTFGKLR TDVIGRTFVP DLPEGERPRM
LASFSGLSMP PYRIRYDERT LTARGARCIA WEEFAIRDED GKLVEIQAVG RDVTDRKDAE
EKLAIALEQA KEANRAKSLF LATMSHEIRT PMNGVIGMTK LLLDTKLDPA QRSYAEAVRA
SGEALLNIIN DILDYSKIEA GKVTLDEAAF DPRNVLESVA ELLAPRAFDK GLEIVTEISP
SVPRMLMGDE ARIRQILLNL AGNAIKFTGR GGVALRLLRE ETSPAGRRID GKREGRIGLI
LEVEDTGIGM DEQAREHIFD DFAQADQSHA RRYEGTGLGL AITKRLVGAM EGRIEVESEE
GRGSVFRAHL PLRLALGEHD GPAPEPLAGL SVVILNDPPL VGAALARAAS AAGADTYLAA
DREALIRALD ASPYDIFICP LDGIAGDGAA LAAHARGRQP GLATLMLLRP QDRGRLAALT
AGPDAPFDGY LIRPVRAASL IARLTALRVR HWMPDVGAPH THDYDDEVVD EEMMPPRVPV
IGIPPLNVLV AEDNEINALL TRTLLEHTGH TVRLARDGAE AVAALEADTG GKIDLVLMDL
HMPGMDGFTA TARIRDLEMP HAALPIIALT ANAMADDRQA CLDAGMDDYL SKPVAAEELG
AALARWAGRR SPLKAASGEK ANRA
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