| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3579 |
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| Symbol | hrcA |
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| ID | 5457033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3826744 |
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| End bp | 3827808 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640879163 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001414834 |
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| Protein GI | 154254010 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.621722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGCG TAATGGATCT CAACGAGCGT TCGCGCGAGA TCCTGCGGCG CGTGGTCGAA
ACCTATCTGG AGACGGGGGA GCCGGTGGGC TCGCGGTTCC TGTCCCGGCA ATTGCCATTG
TCGCTCTCCG CCGCCTCGAT CCGCAACGTC ATGTCGGATC TGGAGGGGCT CGGGCTTATT
TTCGCACCGC ATACCAGCGC CGGCCGGATG CCGACCGAGG CAGGCCTTCG CATGTTCGTG
GACGGGTTGC TCGAAATCGG CGATCTCACG GATGATGAGC GCATTGCGAT CGAGCGGCAG
GTTTCGGGCT CCCACAAGAG CATCGAGGAT GTGCTGGACG AGGCCTCGAA ACTCCTCTCC
GGCCTCAGCC ATGGCGCTGG TTTCGTGGTC GCGCCGACCT ATGACGCGGC GCTCAAACAC
GTCGAATTCG TGCCGATCGA CGCGGAGCGG GCGCTCGTGG TGATCGTGAC GGAAGGCGGC
GCGGTCGAAA ATCGCGTGAT TGAAATCCCC AAGGGCCTGA CGCCTTCGGC GCTGGCCGAG
GCGACCAATT ATCTCAACGC GCAATTGCGC GGGCGGACGC TGGACGAGGC GAAGGCCCAT
CTGGCGCGCG AACTGGAAAC GCAGAAGGCG GAGCTGAACG AGCTCACAGC CAAGGTGATC
GAAGCGGGGC TGGCCACCTG GTCGGGTTCC AATTCGGCGG CCGCCAACAA TGATCCGCTG
GGCAAGTCGC TGATCGTGCG GGGACGCTCG CGGCTTCTGG AGGATGTGCA TGCGGTCGAA
GACCTCGAAC GCATCCGGCT TCTGTTCGAC GAACTCGAGA ACAAGCGCGA TCTCGTGCAG
CTGCTCGGGC TGGCTGAGGC GGCGGACGGG GTCCGCATTT TCATCGGCTC GGAGAACAAG
CTATTCTCAC TATCGGGCTC CTCGCTGATC GTGAGCCCCT ATATGGACAC GCAGCAGCGC
GTGGTCGGCG TGCTCGGCGT GATCGGCCCG ACACGGCTCA ATTATGCCCG CGTGATCCCG
ATGGTCGATT ACACGGCAAA GCTGGTGGGA CGGCTTATCA ACTGA
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| Protein sequence | MVGVMDLNER SREILRRVVE TYLETGEPVG SRFLSRQLPL SLSAASIRNV MSDLEGLGLI
FAPHTSAGRM PTEAGLRMFV DGLLEIGDLT DDERIAIERQ VSGSHKSIED VLDEASKLLS
GLSHGAGFVV APTYDAALKH VEFVPIDAER ALVVIVTEGG AVENRVIEIP KGLTPSALAE
ATNYLNAQLR GRTLDEAKAH LARELETQKA ELNELTAKVI EAGLATWSGS NSAAANNDPL
GKSLIVRGRS RLLEDVHAVE DLERIRLLFD ELENKRDLVQ LLGLAEAADG VRIFIGSENK
LFSLSGSSLI VSPYMDTQQR VVGVLGVIGP TRLNYARVIP MVDYTAKLVG RLIN
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