Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3574 |
Symbol | |
ID | 5456859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3821719 |
End bp | 3823638 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879158 |
Product | chaperone protein DnaK |
Protein accession | YP_001414829 |
Protein GI | 154254005 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.662017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAG TAATCGGTAT CGACCTCGGC ACGACGAATT CGTGTGTCGC GGTGATGGAA GGATCGAGCG CCAAAGTCAT CGAGAATTCC GAAGGCATGC GCACCACCCC GTCGATGGTG GCCTTCACGC AGGATGGCGA ACGTCTTGTC GGCCAATCCG CCAAACGGCA GGCCGTCACC AACCCGACCA ATACGCTCTT CGCGATCAAG CGCCTTATCG GCCGCTCCTA TGACGACCCC ACCACCCAGA AGGACAAGGG CATGGTGCCC TACGACATCG TCAAGGCGCC GAATGGCGAC GCCTGGGTGG AAGCGCATGG CGAGAAATAT TCGCCGTCGC AGATTTCAGC CTTCATCCTG CAGAAGATGA AGGAGACGGC GGAAAGCTAT CTCGGCGAAA AGGTCGAGAA GGCCGTCATC ACCGTTCCCG CCTATTTCAA CGACGCGCAG CGCCAGGCAA CGAAAGACGC CGGCAAGATT GCCGGTCTTG AAGTGCTCCG CATCATCAAC GAGCCGACGG CGGCAGCGCT TGCCTATGGC CTCGACAAGA AGGAAGGCGA GCTGATCGCC GTCTACGACC TTGGCGGCGG CACCTTCGAC GTTTCGATCC TCGAGATCGG CGACGGCGTC TTCGAAGTGA AGTCGACGAA TGGCGACACG TTCCTCGGCG GCGAAGATTT CGACATGCGC CTCGTCAATT ATCTCGCCGA CGAGTTCAAG AAAGAGAACG GCATCGACCT GCGCGGCGAC AAGCTGGCGC TGCAGCGGCT GAAGGAGGCC GCCGAAAAGG CGAAGATCGA ACTCTCCTCG GCCAGCCAGA CGGAAGTGAA CCTGCCCTTC ATCACGGCGG ATGCTTCGGG ACCGAAGCAT CTCACCATGA AGATCACGCG CTCGAAACTC GAGGCGCTGG TGGCGGATCT CATCCAGCGG ACGATCGACC CGTGCAAGGC GGCGCTGAAG GATGCAGGCG TGACCGCCGG CCAGATCAAC GAGATCGTTC TCGTCGGCGG CCAGTCGCGC ATGCCGAAAA TCCGCGAAGC GGTGAAGCAG TTCTTCGGCA AAGAGCCGAA CATGAGCGTG AACCCCGACG AAGTGGTGGC CATGGGCGCC GCCATTCAGG CCGGCGTGCT GCAGGGCGAC GTGAAGGACG TGCTGCTGCT CGACGTGACG CCGCTGTCGC TCGGCATCGA AACGCTGGGC GGCGTCTTCA CACGCCTCAT CGAACGCAAC ACGACGATCC CGACCAAGAA GGCGCAGACC TTCTCGACGG CGGAAGACAA CCAGTCCGCC GTGACGATCC GCGTCTTCCA GGGCGAGCGC GAAATGGCGG CCGACAACAA GCTGCTCGGC CAGTTCGACC TTGTCGGCAT TCCGGCGGCA CCGCGCGGCG TGCCGCAGAT CGAGGTTGCG TTCGATATCG ACGCGAACGG CATCGTCAAT GTGTCCGCGA AGGACAAGGC GACGAACAAG GAGCAGACCA TCCGCATCGA GGCTTCGGGC GGGCTCTCCG AAGCCGACAT CGAGCAGATG GTGAAGGACG CAGAAGCGCA CGCCGAAGAA GACAAGAAGC GGCGCGAGGA AGTCGAGACG CGAAACCACG CGGAAGCTCT CGCCAACGCA ACCGAGAAGA CGCTTCAGGA AAATGCCGAC AAGATCGGCG GCGACGTGAA GGCGGATGTC GAGGCGGCCC TTGAGGCCTT GCGGACCGCG TTGAAGGAAG GTTCGAGCGA GGACATCAAG GCGAAGATGG AAGCGCTCAC CCAGACGTCG ATGAAGATGG GCGAGGCGCT CTACAAGTCC GCGCAGGCGG AAGCCGAAAG CGAGGCCGCT GGCGGCACGG ATGCGTCCGG GGACGATGTC GTCGATGCCG ACTTCGAGGA AGTCGACGAC GACAAGAAAG ACCAGGACAA GTCCGCCTGA
|
Protein sequence | MAKVIGIDLG TTNSCVAVME GSSAKVIENS EGMRTTPSMV AFTQDGERLV GQSAKRQAVT NPTNTLFAIK RLIGRSYDDP TTQKDKGMVP YDIVKAPNGD AWVEAHGEKY SPSQISAFIL QKMKETAESY LGEKVEKAVI TVPAYFNDAQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG LDKKEGELIA VYDLGGGTFD VSILEIGDGV FEVKSTNGDT FLGGEDFDMR LVNYLADEFK KENGIDLRGD KLALQRLKEA AEKAKIELSS ASQTEVNLPF ITADASGPKH LTMKITRSKL EALVADLIQR TIDPCKAALK DAGVTAGQIN EIVLVGGQSR MPKIREAVKQ FFGKEPNMSV NPDEVVAMGA AIQAGVLQGD VKDVLLLDVT PLSLGIETLG GVFTRLIERN TTIPTKKAQT FSTAEDNQSA VTIRVFQGER EMAADNKLLG QFDLVGIPAA PRGVPQIEVA FDIDANGIVN VSAKDKATNK EQTIRIEASG GLSEADIEQM VKDAEAHAEE DKKRREEVET RNHAEALANA TEKTLQENAD KIGGDVKADV EAALEALRTA LKEGSSEDIK AKMEALTQTS MKMGEALYKS AQAEAESEAA GGTDASGDDV VDADFEEVDD DKKDQDKSA
|
| |