Gene Plav_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3564 
Symbol 
ID5455187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3815129 
End bp3815572 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID640879148 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001414819 
Protein GI154253995 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC TTTTGCCGCC TCATCTCTTC CTGATCGCCC TTGTCTCCAT GATCGCACTT 
CATGTGGCGC AGCCCGAGCC GCGCTGGGCA GGCGACACGC AACTCCTTGC GGGTCTCGCC
TTTGCCGCCG TCTTTCTCGC GCTTGCCTTT ATCGGCGCGG CGCAATTTCG CCGTCACCGC
ACCAACATCC ACACATTCCG GAAGCCCGAT ACGCTCGTGA CAAGCGGGCT GTTCCGCTGG
ACGCGCAATC CGATGTATCT CGGTTTCGCC GGCGCGCTTG CCGGCGCGGC GATAGCCATG
AACTGCGTCT CCGGCCTCGT CATCACGCTT CTCTATGTGC TGATCGCCGA TCGTTGGTAC
ATCCGCTTCG AGGAGAGGAC GATGGCGGAG ACATTCGGCC CCGCTTATGC GGAGTACCGG
GCGAAGACGC GCCGCTGGAT CTGA
 
Protein sequence
MQKLLPPHLF LIALVSMIAL HVAQPEPRWA GDTQLLAGLA FAAVFLALAF IGAAQFRRHR 
TNIHTFRKPD TLVTSGLFRW TRNPMYLGFA GALAGAAIAM NCVSGLVITL LYVLIADRWY
IRFEERTMAE TFGPAYAEYR AKTRRWI