Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3553 |
Symbol | |
ID | 5453961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3796243 |
End bp | 3796623 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640879137 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_001414808 |
Protein GI | 154253984 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.654297 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTAT CCGGCGCCTC CATGCGCCAT TACGCTCGCC TGAGCGGATC AACCGCTATT GGCGATGACG AAAACCATCA TCTTATCGCC TTTCTAGCTT GCCGATTCTT GCCAACTTAT GCCAGTGTAA CACAAAATAA CTACCAACAA GCCGGCAATC CCATGATCGA GCAGTCCGAT GAAATCCTCA CCATCGAGGA AGTCGCCACC TACCTGAAAG CAGGTCGGCG CACGGTCTAT CGCCTTGCGG CCAATGGCCA GCTTCCGGCG TTCAAGCTAG GCGGTGTGTG GCGCTTCCGC CGCGCCGAGC TGGAACGATG GATCGCCGCA CGCATCGGTG AGCAGGATGA AAAGCCCAAG CCGGACGAGG GGAGGCAATG A
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Protein sequence | MSVSGASMRH YARLSGSTAI GDDENHHLIA FLACRFLPTY ASVTQNNYQQ AGNPMIEQSD EILTIEEVAT YLKAGRRTVY RLAANGQLPA FKLGGVWRFR RAELERWIAA RIGEQDEKPK PDEGRQ
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