Gene Plav_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3536 
Symbol 
ID5455047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3779844 
End bp3780263 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content67% 
IMG OID640879120 
Producthypothetical protein 
Protein accessionYP_001414791 
Protein GI154253967 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.506052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCT CGCCATCGGC GGGGGCGGCG CCCACCGATG GCTTTCCCAA CGCCGCCGCA 
AAGGAAGTCA TCATGCCTCA GATTGGTCAA TTCACGCGCC AGGACACGGG CTTCGCCGGC
AAGCTGGAGA CGTTCACGCT CTTCCGCGAT GTCGTCATCG TGCCGGCAGA GCCCTCCGAT
GCCGAGAATG CGCCGGATTA CCGCGTTCAC GCCAGCGACG ATGGCAAAGC CGAAGCCGGT
CCGGAAATCG GCGCGGGCTG GAAACGCACC GGCGAGCGCG CGGGCGAATA CGTTGCCGTA
CTGATCGACG ACCCTGCGCT GCCGCAGCCG ATCCGCGCCA ATCTGTTCTG CGACGATGAC
GCCGGGAACG CCTGGTCGCT GCACTGGTCG CGCCCGCGCG ACCGCGCCGG GAAGGACTGA
 
Protein sequence
MNTSPSAGAA PTDGFPNAAA KEVIMPQIGQ FTRQDTGFAG KLETFTLFRD VVIVPAEPSD 
AENAPDYRVH ASDDGKAEAG PEIGAGWKRT GERAGEYVAV LIDDPALPQP IRANLFCDDD
AGNAWSLHWS RPRDRAGKD