| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3531 |
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| Symbol | |
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| ID | 5456256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3776729 |
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| End bp | 3777889 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879115 |
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| Product | replication protein A |
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| Protein accession | YP_001414786 |
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| Protein GI | 154253962 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0674076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.696924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTGC GTCGTCGTGA CCCTTCGGAG CGTGGGCAGC TCGACCTGTT TCGCGCGCTT
CCCGGCGACT TCGCGCCACG AGACGCGCAG GATCTCATGG CCTATCCCTT CTTCTCCCTC
TCGAAATCGC ACCGCATAGC GCCGATCGAC TTTTCGGCCG GCGGTGTCTC CATCCGGGTA
GAGGCCGTTC CCGATCATGG CATGGCCACG ATCTGGGACG CCGACATCCT GATCTGGGCC
GCCAGCCAGA TCGTCGAGGC CCGCGACGCG GGCCTGCGCA CCTCGCGTCT GATGGCGGCG
ACACCCTATG AGATCCTCAC CTATGTCGGG CGCGGCACAT CCATGCGCGA CTATCAGCGC
CTCAAGGCCG CGCTCGACCG GCTGCAATCG ACCACCATCT CGACGTCGAT CCGCCAGCCC
GCCGAAGGCC GCCGTCACCG CTTCTCGTGG ATAAACGAGT GGCAGGAGCG CACGGATCAC
CAAGGACGAC CCGATGGCAT CGAGCTGATC GTCCCCGACT GGTTCTACAA GGCCGTCCTC
GATGACGCGC TCATCCTCAC CATCGATCCG GCCTATTTCG ATCTCACCGG CGGCCTCGAT
CGCTGGCTCT ACCGCATCGT GCGCAAACAC GGAGGCCGTC AGCGCGGCGG CTGGCGTTTC
GACCTACGCC ACCTCCACCT CAAATCCGGC AGCCTGTCGC CGTTCAAGCG CTTCGCCTTC
GAACTGCGCG ACATCGTGCG ACGCCAACCA CTGCCCGGCT ACCTCCTGTC GCTCGAAGTG
GAAATCGGCG GGCGCACGCT GCTGGCTTTC GAGCCACTAG CCGCCTGTGG AAAACCTGTG
GACGGCCTCG TGCTATCGGG AACCCGACCT ATCGTGCCAT CGGGAACCCG AGGCTCGTGC
CATCGGGAAC CCAAGCCGGC CTTAACGTCT GGAAATCGTG GGCGGATTCG CGCCCTTAAC
TTAGAGTCTA ACCAAGAATC TAACTTTGAA GAGCGCGCGC GCGATGTGGA AAACCTCATC
CGCACCGCCG CAGCGAGCCT CCGCGCCGCC GGCAAATCAC CGCGCAAGGG TGCTCCAGCC
GCTCAGACGG GCCGGAAAGA GAGCGAACCG GCTTCCCCCG ATCAGCTTCC GCTCCTCGAT
CGGCCTGGAG GTGCGCGATG A
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| Protein sequence | MVVRRRDPSE RGQLDLFRAL PGDFAPRDAQ DLMAYPFFSL SKSHRIAPID FSAGGVSIRV
EAVPDHGMAT IWDADILIWA ASQIVEARDA GLRTSRLMAA TPYEILTYVG RGTSMRDYQR
LKAALDRLQS TTISTSIRQP AEGRRHRFSW INEWQERTDH QGRPDGIELI VPDWFYKAVL
DDALILTIDP AYFDLTGGLD RWLYRIVRKH GGRQRGGWRF DLRHLHLKSG SLSPFKRFAF
ELRDIVRRQP LPGYLLSLEV EIGGRTLLAF EPLAACGKPV DGLVLSGTRP IVPSGTRGSC
HREPKPALTS GNRGRIRALN LESNQESNFE ERARDVENLI RTAAASLRAA GKSPRKGAPA
AQTGRKESEP ASPDQLPLLD RPGGAR
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