Gene Plav_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3524 
Symbol 
ID5456756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3774107 
End bp3774469 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID640879109 
Producthypothetical protein 
Protein accessionYP_001414780 
Protein GI154253956 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.898336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.799269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGGG CTCGAAACGG AAAACGGAGA CTTACAATGG CGACCATCGG CACCTTCAAG 
AAGACCGGCT CGAACGAATT CGGCGGCGAA ATCGTCACCC TCAGCGTCCA GGCCAAAGGC
GTGCGCATCG TCCCCGACCT GCGCGCCAGT GGCGAGAACG CCCCCAGCCA CCGGGTCCTG
GTCGGCCGCG CCGAGATCGG CGCCGCCTGG TCCAAACGCT CCAACGAGGG CCGCGACTAT
CTGGGCCTCA AGCTCGACGA TCCGAGCTTC AACGCTCCGA TCTACGCCAA CCTCTTCGAT
GACGAGGACG GCGAAGGTTA CTCGCTGATC TGGTCCCGCC CCAACGGCCG CCGCGCAGAC
TGA
 
Protein sequence
MVRARNGKRR LTMATIGTFK KTGSNEFGGE IVTLSVQAKG VRIVPDLRAS GENAPSHRVL 
VGRAEIGAAW SKRSNEGRDY LGLKLDDPSF NAPIYANLFD DEDGEGYSLI WSRPNGRRAD