| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3517 |
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| Symbol | |
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| ID | 5453936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3765155 |
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| End bp | 3769474 |
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| Gene Length | 4320 bp |
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| Protein Length | 1439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879102 |
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| Product | putative methylase/helicase |
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| Protein accession | YP_001414773 |
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| Protein GI | 154253949 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.646689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.782963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA TGTCCCCCGT AGCCGGTCCG GCTGCGCCCG TTGCCCGCGC GTCCGCCATC
ATCGCCGCCG CCCATCAGCT TCTCACCCTG CTCGAACGCG GCCAGCGGAT GGACAACGCC
GATCTCCGCA TCGCCATGGA AACGGCCTTC GAGGCTTCCG ACACGAGCGG CGCTTGGGAC
TGGAAGACGG CCTACGAAGC CTGTGAAGGC GCGACCGTCC TGTTCCTGCG CAAATACGGA
CGTGCGCTTT TCCGTAAAGC CGGCACTCCG GCTGCACGGC TTTCCGCTTT GTCGAAAATC
ACCGGCCTTC TGCCGACGCA CACCCGTCGC TCCGAGGAAG CCCAGGCGCT TCAGCAATTC
TCGACGCCGG TCCCGCTCGG CCTCGCCGCT ATCGCGGCCG CCGCGATCAC AACGCACGAC
ATTGTGCTGG AGCCGTCGGC AGGCACGGGT CTTCTCGCCA TCCTCGCCGA GATCAGCGGC
GGCTCGCTGC TTCTCAACGA ACTGGCGGAA ACCCGCGCCG ATCTACTTGG CCAGCTCTTT
CCCGCCCTTG CCGTCACGCG ATGCGACGCC GCCCAGATCG ACGACCACCT TCCGGCGTGC
GCCGTCCCTT CCGTCATCGT GATGAACCCG CCCTTCTCGG TGATGGAGCA CGTCTCCGGC
CGGGTCGCCG ACGCCGCTGC GCGTCATGTT GCTTCGGCCC TGGCGCGGCT TGCCGATGGT
GGGCGTCTGG TGACGATCAC CGGCGCAAAC TTCGGCCCCG AGCAACCGGC CTGGCGCGAC
ACCTTCGCCC GGCTTCAGGT GCGTGGCCGC GTCGTCTTCA CCGCGGCGAT CCACGGCTCG
GTCTATGCCA AGCATGGCAC GAGCATCGAA ACGCGGCTGA CCGTCATCGA CAAGCTGCCG
GCCGAAGACC CGGCCACGTT CCCTGCGTCC GCTGGCGTTG CGCCCGACGT CGCCACGCTG
CTCGCATGGA TCGAAGCGCG GATTCCACCG CGCCTGCCGG TCGCACTGCC CGACATCGCG
CCGCCCGTGT CGGGTTCGGC ACCCCGCACC GTGCGGGGTT ATCTCGCGCG CACCGCCACA
GAGCGTCCGG CCGCACGCTC CACCATGGAT CCGCAGGGCG TTGAACTCGC CTACGACACG
ATGGACTGGA CGCCGCCGGA AGGCGCCCAC CTCACGGATG CGATCTATGA AGAATACGGA
TTGCAGTCGA TCCGTATTGC CAGTTCTCAG GCGCACCCCA CCAAGCTCGT GCAGTCGGCG
GCCATGGCGA GCGTTGCACC GCCCAAGCCC GCCTATCGGC CGATGCTGCC CGCGAACATC
ACCGATCTCC TGTCGGACGC CCAGCTCGAA ACCGTCATCT ATGCCGGCGA AGCCCATTCG
GACTTCCTCA CCGGCTCCTG GACCGTCGAT GCGACCTGCG ATCTCGTGCA GGCGGCCAAG
CCCGATGCCG AAAACGCCGT GCGCTTCCGG CGCGGCTTTA TGCTCGGCGA CGGCACCGGA
GCCGGCAAAG GCCGTCAATC TGCCGGCATC ATCCTCGACA ACTGGCTGCG CGGTCGCCGC
AAGGCGGTCT GGATCTCCAA ATCCGACAAG CTGATCGAGG ACGCGCAGCG CGATTGGTCA
GCGCTCGGCA TGGAGCGCCT GCTGGTCACG CCGCTGTCGC GCTTCGCGCA AGGGCGGCCG
ATCACGCTGT CGGAAGGCGT CCTGTTTGCA ACCTATGCCA CGCTACGGTC CGACGACCGT
GGTGAGAAGG TTTCCCGCGT CCGGCAGATC GTCGAATGGT TGGGCTCCGA TTTCGATGGA
GTGATCATTT TCGACGAGAG CCACGCCATG GCCAATGCCG CAGGCGGCAA GGGAGAACGC
GGCGACGTTT CCGCCTCACA GCAGGGACGC GCGGGCCTTC GGCTTCAGCA CGCCCTGGCC
AACGCGCGCG TCGTCTATGT GTCGGCTACC GGCGCGACCA CCGTCCACAA TCTCGCCTAT
GCCCAGCGGC TCGGCCTGTG GGGCGGTGAG GATTTCCCCT TCGCCACCCG CGCCGAATTT
GTCGAGGCGA TCGAGGACGG CGGTGTCGCG GCCATGGAAG TGCTCGCCCG CGATCTGCGT
GCACTGGGCC TCTATACCGC CCGATCGCTC TCCTACGATG GCGTCGAATA CGAGCTGATC
GAGCACGACC TGACCGACGA GCAGCGGCGT ATCTACGATG CCTACGCCAG CGCCTTCGCC
GTCATCCACA ATCATCTCGA CGCCGCGATG CAGGCGGCCA ACATCACCGG CAACCCAGAT
AGCGGGGGAG CCACACTGAA CCGCCAGGCC AAGTCCGCCG CCCGCTCGGC CTTCGAGTCC
GCCAAGCAGC GTTTCTTCGG CCATCTGCTC ACGTCGATGA AAACGCCCAC GCTGATCCGG
TCCATCGAAC GCGACCTGGA TGATGGCCAC GCCGCTGTCG TCCAGATCGT CTCGACCGGC
GAAGCGCTGA TGGAGCGCCG GCTGGCGGAA GTCCCGACCA AGGAATGGAA CGATATTCGT
GTCGACATCA CACCCCGCGA ATATGTTCTG GACTATCTGG CCCATTCCTT TCCGGTCCAA
CTCTACGAGC CGTTCACGGA TGGCGAGGGC AATCTGTCCT CGCGCCCGGT CTATCGCGAT
GGCCACCCCG TCGAGAGCCG CGAAGCTGTC GCGCGCCGGG ACGAGCTGAT CGAACGTCTT
GCGTCTTTAC CACCCGTTCC GGGGGCGCTC GACCAGATCG TACAGCGCTT CGGCACAGAT
ATGGTCTCCG AGGTGACGGG CCGCTCCCGG CGCATCGTCC GCAAGGGGGA ACGCTTCGCC
GTCGAAAACC GCGCGCCATC CGCCAACCTT GCCGAGACGG CCGCGTTCAT GGACGATCTG
AAGCGCGTTC TCGTGTTCAG CGACGCCGGC GGCACCGGCC GCAGCTATCA CGCAGAACTG
TCGGCGAAGA ACCGGCGTCT GCGCGTGCAT TATCTGCTCG AACCCGGATG GAAGGCCGAC
GCCGCCATCC AGGGTCTGGG CCGCACCAAT CGCACCAACC AGGCGCAGCC GCCGCTGTTC
CGCCCGATCG CCACGAACGT CAAAGCCGAG AAACGCTTCC TGTCCACGAT CGCGCGCCGG
CTCGATACGC TGGGCGCGAT CACGCGCGGT CAGCGCCAGA CCGGCGGCCA AGGCCTGTTC
CGGCCCGAGG ACAATCTGGA ATCGAGCTAC GCCCGCGATG CGCTGCGGCA GCTCTATCTC
CTGATCGTGC GCGGCAAGGT CGAGGGTTGC TCGCTGGGTC GCTTCGAGTC CGCGACCGGC
CTGAAATTGA CCGATGACAA CGGCATCAAG GACGAGTTGC CGCCGATCAC CACGTTCCTC
AACCGCCTGC TGGCGCTGAC CATCGAGCTT CAGGGCATCC TCTTCACCGC CTTCGAGCAA
TTGCTCGACG CCAAGGTGGC CGGAGCCATC GCCAGCGGCG TTTATGATGT CGGGCTGGAA
ACGCTGACGG CGGAGAGTTT CGTCGTCGCT GAGCGCACGA CCATCTACAC CCATCCGGCA
ACGGGCGCAC AGACGCGGCT GCTCACGATC ACCGAGCGCC GCCGAAACCA GCCAACCACG
CTCGATACGG CGCTCGACTG GCTCGACGAT CCGCATGCCC GGCTGCTCAT CAACGCGCGG
TCGGGACGCG CTGCTGTCCA GGTGCCGGCG CCGTCCATCA TGCTCGACGA CGGCGAGATC
GAACGTCGCG TCCGCCTGAT CCGGCCGATG GAACAGCACC ACGCAAGCCT CGCCATGATG
GAAGACAGCT ATTGGCAGGA AGCCGCTCGC GACAGCTTTG CAGCGGTCTG GCAACGGGAA
GTCGCCGAAG TGCCGGCCTA TACCGATGGC GCCATCCACA TGGTCAGCGG TTTGCTCCTG
CCGGTGTGGA AGCGCCTGCC GAACGAGTCG ACGCGCGTCT ATCGGCTCCA GACCGACGAT
GGCGAACGCA TCATCGGGCG GCGGGTTTCG TCCGCCTGGG CCCTGAATGC CGCCTCGACG
GGAACGGCCA ACCTCAGCAG CGATGATGCC TATGCCGCTC TGGTGGATGG TCGCACCATC
CTCGACCTGG CCAGCGGACT CCAGCTTCGC CGCGCGCGCG TCATGGGCGC GAACCGGATC
GAACTGTCCG GCTTCACCGA CACCATGCGG GATCGCCTGC GCGCCTATGG CCTCTTCAGC
GAGATCATCT CGTGGAAGCT GCGCTTCTTC GTCCCGGTCG ATGCCTCTGG TCCCGCCATC
ATCGGCAAGC TGCTCGCCAC CTATCCGGTC GAGCGGATCA GCGAGCGTGA GGCAGCGTGA
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| Protein sequence | MNIMSPVAGP AAPVARASAI IAAAHQLLTL LERGQRMDNA DLRIAMETAF EASDTSGAWD
WKTAYEACEG ATVLFLRKYG RALFRKAGTP AARLSALSKI TGLLPTHTRR SEEAQALQQF
STPVPLGLAA IAAAAITTHD IVLEPSAGTG LLAILAEISG GSLLLNELAE TRADLLGQLF
PALAVTRCDA AQIDDHLPAC AVPSVIVMNP PFSVMEHVSG RVADAAARHV ASALARLADG
GRLVTITGAN FGPEQPAWRD TFARLQVRGR VVFTAAIHGS VYAKHGTSIE TRLTVIDKLP
AEDPATFPAS AGVAPDVATL LAWIEARIPP RLPVALPDIA PPVSGSAPRT VRGYLARTAT
ERPAARSTMD PQGVELAYDT MDWTPPEGAH LTDAIYEEYG LQSIRIASSQ AHPTKLVQSA
AMASVAPPKP AYRPMLPANI TDLLSDAQLE TVIYAGEAHS DFLTGSWTVD ATCDLVQAAK
PDAENAVRFR RGFMLGDGTG AGKGRQSAGI ILDNWLRGRR KAVWISKSDK LIEDAQRDWS
ALGMERLLVT PLSRFAQGRP ITLSEGVLFA TYATLRSDDR GEKVSRVRQI VEWLGSDFDG
VIIFDESHAM ANAAGGKGER GDVSASQQGR AGLRLQHALA NARVVYVSAT GATTVHNLAY
AQRLGLWGGE DFPFATRAEF VEAIEDGGVA AMEVLARDLR ALGLYTARSL SYDGVEYELI
EHDLTDEQRR IYDAYASAFA VIHNHLDAAM QAANITGNPD SGGATLNRQA KSAARSAFES
AKQRFFGHLL TSMKTPTLIR SIERDLDDGH AAVVQIVSTG EALMERRLAE VPTKEWNDIR
VDITPREYVL DYLAHSFPVQ LYEPFTDGEG NLSSRPVYRD GHPVESREAV ARRDELIERL
ASLPPVPGAL DQIVQRFGTD MVSEVTGRSR RIVRKGERFA VENRAPSANL AETAAFMDDL
KRVLVFSDAG GTGRSYHAEL SAKNRRLRVH YLLEPGWKAD AAIQGLGRTN RTNQAQPPLF
RPIATNVKAE KRFLSTIARR LDTLGAITRG QRQTGGQGLF RPEDNLESSY ARDALRQLYL
LIVRGKVEGC SLGRFESATG LKLTDDNGIK DELPPITTFL NRLLALTIEL QGILFTAFEQ
LLDAKVAGAI ASGVYDVGLE TLTAESFVVA ERTTIYTHPA TGAQTRLLTI TERRRNQPTT
LDTALDWLDD PHARLLINAR SGRAAVQVPA PSIMLDDGEI ERRVRLIRPM EQHHASLAMM
EDSYWQEAAR DSFAAVWQRE VAEVPAYTDG AIHMVSGLLL PVWKRLPNES TRVYRLQTDD
GERIIGRRVS SAWALNAAST GTANLSSDDA YAALVDGRTI LDLASGLQLR RARVMGANRI
ELSGFTDTMR DRLRAYGLFS EIISWKLRFF VPVDASGPAI IGKLLATYPV ERISEREAA
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