| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3513 |
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| Symbol | |
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| ID | 5455191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3761773 |
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| End bp | 3763893 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879098 |
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| Product | nuclease |
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| Protein accession | YP_001414769 |
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| Protein GI | 154253945 |
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| COG category | [K] Transcription |
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| COG ID | [COG1475] Predicted transcriptional regulators |
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| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.557046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG CCATCCAGAA GATCACCCTG TCGTCGGCGC GCGACATCCC CTTCAACAAG
CTGGCGCTGA GCCAGTCCAA CGTCCGACGC GTCAAGGCCG GGGTCTCGAT CGAGGAAATG
GCCGAGTCCA TCGGCCGGCG CGGCCTCATC CAGAGCCTCC ATGTCCGCCC GGTCCTTGAT
GGTGATGGCG CGGAGACCGG CATGTTCGAG GTGCCGGCCG GCGGCCGCCG CTATCGCGCA
CTCGAACTGC TCGTGAAGCA GAAGCGTTTG GCCAAGACGG CGACGGTGCC CTGCGTCATC
GGCGACGCCA ACAGCGACAT CCTCGTCGAC GAAGTGTCGC TAGTCGAGAA CATGGAACGC
GCACCACTCC ATCCACTCGA CCAGTTCCGC GCCTTTCAGG CCATGCGCGA CAAGGGCATG
ACCGAGGAGG CCATCGCCGC CGCCTTCTTC GTCAACGTCA CCGTGGTGAA GCAGCGCCTG
CGTCTCACCT CCGTTTCGCC GACCCTGCTC GAAACCTATG CCGATGACGG CATGACGCTC
GAACAGCTCA TGGCCTTCAC CGTCAGCCCC GACCATGCCC GTCAGGAGCA GGTCTGGGAC
GCGATCAAGG ATAGCTGGCA GAAGGAGCCC TACCAGATCC GGCGGATGCT GACCGAGACC
GCGGTTCGCG CCTCGGACAA GCGGGCCAAT TTCGTCGGTG TCGATGCCTA CGAGGCCGCA
GGCGGCATCG TACTGCGCGA TCTCTTCCAG TCCGACGACG GCGGTTGGCT GCAAGACCCC
GTCCTGCTCG ACCGTATGGT GGCGGAGAAG CTGAAAGCCA CCGCCGATCA GATCGCCGAG
GAAGGCTGGA AGTGGATCGA GGTCGCGGTG AGCTTCCCCT ATGGCCACGA CCACGGCCTG
CGTGAACTCG CCGGCGTTGC GGTCGATCTG ACCGACGAGG AGCGTGCGAC CCGCGAAGCG
CTGCGCGAGG AATATGACCG GATCGAAGCG GAATATTCCG AGGCCGACGA GCTGCCCGAC
GCGATCGATC AACGTCTCGG CGAGATCGAG CAGGCCCTGG AGGCCTTCGA GAACCGCCCC
GTCAGCTACG ATCAGGCCGA CATCGCAATC GCCGGCGCCT TCGTCAGCCT CGACGCCGAC
GGTTCGCTGT CGATCGACCG CGGTTATGTC CGCGCCAAGG ATGAGCCCCA GGCCGAGCCC
GATGGCGAGG CGTCCGGGGG CGACCAGCCC GATACGCCGG CCGTCCAACG CGCGGTCATC
ACCATCGGTG GCCAGCCCGC CGAGCCCGAG GACGATGAGG AAGACGGCAT CAAGCCGTTG
CCCGAGCGTC TCGTGATCGA GTTGACCGCC CATCGCACCC TGGCGCTGCG CAACGCGCTG
GCGGAACATC CGCACGTCGC CATGACCATG TTGCTGCACA AGCTTCTGAG CGACACCTTC
ATCCACACCA ACCCGTCCGG TTGCCTCGAG GCCAATGTCC GCCACATCTT CTTCTCGGCC
CAGTCCGAGG AATTGAAGGA CAGCCCATCG GCGCAGGCGG TCAACGATCG CCACGAACGC
TGGGGGGATC ACATCCCCGC TGACAATGAG GCGCTCTGGG ACTGGCTGAC CGATCTCGAT
GACGGCACGC GCCTGGAACT TCTGGCGCTT TGCGTCAGCT ACGGCGTCAA TGCGCTATTC
GAGCGTCCGA ACCCCTATTC CGGCTCGGGC GTCAGCCAGC ATGGCCTCGA TATGCGTCTG
GCGCAGGCCG ACCGGCTCGC ACGGGCTACG GGCATGGACA TGGTGGCCGC AGGCTGGAAG
CCCACTGTCG GCAATTATCT CGGCCGCGTG ACCAAGCCCC GCATTCTCGA AGCCGTGCGT
GAAGGTGCCG GAGAGCGGGC CGCGCAGCTC ATCGACCACA TGAAGAAGGG CGACATGGCC
AAGGAAGCCG AGCGCCTTCT GGCCGACAGC GGCTGGCTGC CCGAGCCGCT GCGCCTCGCG
TCCATCGATG GCGATCAGTC TGGTCCCGAC GATCAGGCCG ATAACGGCGA AGACACCGCC
TTGCCGGACT TCCTCACCGA GGACGGCGAG GACGAAGACA CCGACGAGGA TGAAGTCCAG
CACGCCGTCG CCGCCGAATA G
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| Protein sequence | MATAIQKITL SSARDIPFNK LALSQSNVRR VKAGVSIEEM AESIGRRGLI QSLHVRPVLD
GDGAETGMFE VPAGGRRYRA LELLVKQKRL AKTATVPCVI GDANSDILVD EVSLVENMER
APLHPLDQFR AFQAMRDKGM TEEAIAAAFF VNVTVVKQRL RLTSVSPTLL ETYADDGMTL
EQLMAFTVSP DHARQEQVWD AIKDSWQKEP YQIRRMLTET AVRASDKRAN FVGVDAYEAA
GGIVLRDLFQ SDDGGWLQDP VLLDRMVAEK LKATADQIAE EGWKWIEVAV SFPYGHDHGL
RELAGVAVDL TDEERATREA LREEYDRIEA EYSEADELPD AIDQRLGEIE QALEAFENRP
VSYDQADIAI AGAFVSLDAD GSLSIDRGYV RAKDEPQAEP DGEASGGDQP DTPAVQRAVI
TIGGQPAEPE DDEEDGIKPL PERLVIELTA HRTLALRNAL AEHPHVAMTM LLHKLLSDTF
IHTNPSGCLE ANVRHIFFSA QSEELKDSPS AQAVNDRHER WGDHIPADNE ALWDWLTDLD
DGTRLELLAL CVSYGVNALF ERPNPYSGSG VSQHGLDMRL AQADRLARAT GMDMVAAGWK
PTVGNYLGRV TKPRILEAVR EGAGERAAQL IDHMKKGDMA KEAERLLADS GWLPEPLRLA
SIDGDQSGPD DQADNGEDTA LPDFLTEDGE DEDTDEDEVQ HAVAAE
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