Gene Plav_3503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3503 
Symbol 
ID5454625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3749483 
End bp3749953 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content55% 
IMG OID640879088 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001414759 
Protein GI154253935 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.936272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.391713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA TTTCCGCCTG CCTGTGGTTC GATACCCAGG CCGAAGAGGC AGTGAACTTC 
TACACCTCCA TCTTCAGAAA TTCGAAAAAG GGCAGGGTGC TGCACTACGG CGAAGAAGCG
CCCATGAAGG CCGGAACGGT GCTCACCGTC GAATTTGAAA TCGAAGGGCA GCAATTCACC
GCCCTCAATG GCGGGCCGAT CTTCCAGTTC AACGAAGCCG TCTCGTTCAT GGTCGACTGC
AAATCCCAGG ACGAGGTTGA CTACTACTGG AACAAGCTTC TGGAAGGCGG TCGGGAGCAG
CAATGCGGCT GGCTCAAGGA CAAGTTCGGC GTGTCGTGGC AGATCGTCCC CTCGGTCCTC
ATCGAGATGA TGAACGATCC CAACGCTGAG AAAGCACAAA GGGTAACACA GGCGATGTTG
CAGATGGTCA AGCTCGATAT CGCGAAGCTT GAAGCCGCCT ACGCTGCATA A
 
Protein sequence
MQKISACLWF DTQAEEAVNF YTSIFRNSKK GRVLHYGEEA PMKAGTVLTV EFEIEGQQFT 
ALNGGPIFQF NEAVSFMVDC KSQDEVDYYW NKLLEGGREQ QCGWLKDKFG VSWQIVPSVL
IEMMNDPNAE KAQRVTQAML QMVKLDIAKL EAAYAA