Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3501 |
Symbol | |
ID | 5454502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3747676 |
End bp | 3748689 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879086 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001414757 |
Protein GI | 154253933 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.465584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA ACCCCGTCGT CGCCATTGCG GGCGCGACCG GCGCCGTGGG CGTCGAGATG ATCCGCTGCC TCGAAGAGCG CAACTTCCCG GTGAAGGAGC TGAAGCTCCT TGCCAGTGCG CGTTCGGCGG GCAAGACCAT GAAATTCCGG GGCAAGGATA TCGTCGTCGA GGAACTGACC GAAGCGAGCT TCAAGGGCGT CGACATCGCC TTCTTCTCGG CGGGGGGCGG CATTTCGCGG AAGTTCGCAC AGGCAGTGAA GGAGGCGGGC GCGGTGATGA TCGACAATTC GTCGGCCTAC CGCATGGACC CGAACGTGCC GCTCGTCATT CCGGAGATCA ATCCGGAAGC GGCGCTTCAC CACAACGGCA TCATCGCCAA TCCGAACTGT TCGACCATCA TCGCGATCAC GCCGCTCTGG CCGATCCACA AAGTGAACCG CGTGAAGCGG CTCGTCGCGG CGACCTATCA GGCGGCCTCA GGCGCGGGCG CGGCGGCGAT GGAAGAGCTC GAACAGGCGA CGCGTGCGTT TCTCTCGGGC GAGCCCTTCG AGCAGAAGAT CATTCCGCAT CCCTATCCCT TCAACGTCTT CAGCCACAAT TCCAATGTGG ACCCCGAAAC GGGCTACAAC GAGGAAGAGC TGAAGATGGT GAAGGAGACG AAAAAGATTT TCGGCGACGA CAACATCCGC GTGACGGCGA CCTGTGTGCG CGTGCCGGTT TTGCGCGCAC ATTCCGAAGC GCTCGATTTC GAGTGCGAAA ACCCGATCAC GCCGAAGGAA GTGCGCGACA TTCTCGCGAA GGCGCCGGGT GTGAAGATCG TCGACGATGT GAGCGCGAAT TATTTCCCGA TGCCGAAAGA CGCTTCCGGC AAGGACGACA TTCTCGTTGG CCGCATAAGG CAGGATATTT CCGACCCCTC GGGCCGGTCG ATCGCGATGT TCGTCGCGGG CGACCAGTTG CTCAAGGGTG CGGCGCTCAA CGCGGTGCAG ATCGGCGAGT TGCTGGTTCG CTGA
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Protein sequence | MNPNPVVAIA GATGAVGVEM IRCLEERNFP VKELKLLASA RSAGKTMKFR GKDIVVEELT EASFKGVDIA FFSAGGGISR KFAQAVKEAG AVMIDNSSAY RMDPNVPLVI PEINPEAALH HNGIIANPNC STIIAITPLW PIHKVNRVKR LVAATYQAAS GAGAAAMEEL EQATRAFLSG EPFEQKIIPH PYPFNVFSHN SNVDPETGYN EEELKMVKET KKIFGDDNIR VTATCVRVPV LRAHSEALDF ECENPITPKE VRDILAKAPG VKIVDDVSAN YFPMPKDASG KDDILVGRIR QDISDPSGRS IAMFVAGDQL LKGAALNAVQ IGELLVR
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