| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3495 |
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| Symbol | |
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| ID | 5453691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3742871 |
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| End bp | 3743695 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879080 |
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| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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| Protein accession | YP_001414751 |
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| Protein GI | 154253927 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.82387 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTAC AATCCAAGAT CAAGCGCGTC ACCGTGCCTG AAATTCGCGC CCGCAAGGGA
GCGGAGCCCA TCGTCTCCCT CACCGCCTAT CACGCGCATA CGGCGCGCTA CATCGACCCC
TATGTCGACT TCCTCCTCGT GGGCGACAGT CTCGGCATGG TCATGTACGG CATGGAGACG
ACGCTCGGCG TCACCCTCGA CATGATGATT GCTCACGGCG CCGCCGTGGT GCGCGGCACC
GAGCGCGCGC TGGTCGTGGT CGACATGCCC TTCGGCTCCT ACGAGGAAAG CCCCGAAATT
GCCTTCCGAA ATGCCTGCCG GGTCATCAAG GAAACCGGCT GCACGGCGGT AAAGCTCGAA
GGCGGCACCC GCATTGCCGA AACGATCCGT TATCTCACCT TGCGCGGCAT CCCCGTCATG
GCCCATATCG GCCTCACGCC GCAGAACATC CAGGTCATGG GCGGCTTCAA GACGCAAGGC
CGCGAAGAGG GCGAATGGGC CGCCATCGAG GCAGATGCCA AGGCCGTCGC GGAGGCTGGC
GCCTTCGCCG TCGTGCTGGA GGGCATGGCC GAGCCGCTCG CCGCCCGCAT TACCGGTCAG
ATCGACATCC CGACCATCGG CATCGGCGCC TCGCCCAATT GCGACGGCCA GATTCTGGTG
CTCGAGGACA TGCTGGGCCT CTCGCCCCGC CCGGCGAAAT TCGTCCGCGA ATTCGCCACT
CTGGGGGCCC AGATCGCCGG TGCGGCGGAG GCCTATGCCC GCGCCGTCCG CGAGCGCAGC
TTCCCGGCGG CGGAACACAC CTACAGCATG AAAAAGGCAA AATAG
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| Protein sequence | MSVQSKIKRV TVPEIRARKG AEPIVSLTAY HAHTARYIDP YVDFLLVGDS LGMVMYGMET
TLGVTLDMMI AHGAAVVRGT ERALVVVDMP FGSYEESPEI AFRNACRVIK ETGCTAVKLE
GGTRIAETIR YLTLRGIPVM AHIGLTPQNI QVMGGFKTQG REEGEWAAIE ADAKAVAEAG
AFAVVLEGMA EPLAARITGQ IDIPTIGIGA SPNCDGQILV LEDMLGLSPR PAKFVREFAT
LGAQIAGAAE AYARAVRERS FPAAEHTYSM KKAK
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