Gene Plav_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3492 
Symbol 
ID5455168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3739166 
End bp3740587 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content64% 
IMG OID640879077 
Productsmall GTP-binding protein 
Protein accessionYP_001414748 
Protein GI154253924 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.166224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCATTCA AGGTCGCCAT TGTCGGTCGG CCCAATGTCG GCAAGTCCAC GCTGTTCAAC 
CGGCTCGTGG GCAAGAAGCT CGCATTGGTG GACGATACGC CGGGCGTAAC GCGCGACCGT
CGCGAGGGAG AGGCGCGTCT TGGCGACCTG TCCTTCACCA TCATAGATAC GGCCGGGCTG
GAAGAAGCCG CCACAGGCAC CCTTGAAGCC CGCATGCGCA TCGGTACCGA GCGTGCCATT
GCCGATGCGG ATCTTTGTCT CCTGCTGATC GATGCACGCG CGGGCGTGAC GCCGCTCGAC
AAGAGCTTCT CGCAAATTCT CCGCAAGTCG CCGACGCCGG TCATCCTAGC CGCCAACAAA
TGCGAAGGTG GCGCGGGGAA GGCCGGCCGG ATGGAGGCTT ATGAGCTCGG CCTCGGCGCG
CCGCTTCCGC TCTCGGCTGA ACATGGCGAA GGGCTCGGCG ACCTTTATGA CGCGCTCGCC
CAATTCGCGA AGGGCCTCGA AGCGGACGAT GCCGGACAGG CGGTCGAGGA TGCGCTCGCC
GAGGAGCAGG ATGCCGACGC AGGCTTCGAT CCGGACGCGC CCTATGAGCC GGACCTCGAA
GCCCCTCTCC GTGTCGCCAT CATCGGCCGT CCCAATGTCG GCAAGTCGAC CCTCGTCAAT
CAGCTTCTCG GCGAAGACCG GATGCTCACC GGCCCCGAAG CCGGTATCAC CCGCGACAGT
ATCGGCATCG AATGGGAATG GCGCGGCCGC CGCGTCAAGC TCTGGGATAC TGCCGGCATG
CGGCGCCGCG CCCGCGTTAC CGAAAAGCTC GAAAAGCTTT CGGTGGCGGA CACACTCCGC
GCCGTCCGCT TCGCCGAGGT CGTCGTCATC CTTCTTGACG CAACGCAGCC TTTCGAGCGG
CAGGACCTCC ATATCGCCGA TCTCGTGGAG CAGGAAGGCC GCGGCCTCCT GATCGTCGTC
AACAAATGGG ACATGGTCGC GGAGCCGCAG GAAGTGCTTC GTGTGCTGAA GGAAGAGCTG
GAGCGTCTTC TGCCGCAGAT ACGTGGCGTT CCCATCGTCA CGCTGTCGGC GCTGACGGGC
AGGGGAACGG ACAAGCTCAT GCCCGCCATC GAGCGTGTGC ATACCTTCTG GAATGCGCGC
GTCCCGACAG CGCGGCTCAA TCGCTGGATG CAGGAAGCCG TTTCCCGCCA CCAGCCGCCC
GCCGCGCATG GCCGCCCGGT CAATCTGAAA TATATATCTC AGGTGAAGTC GCGCCCGCCC
ACCTTCGCCG TCTTCTCCAG CCGCGCAGAC GACGTGCCGA CCTCCTATCG GCGCTATCTG
GTGAACGGCC TGCGCGAAAC TTTCGATCTG CCGGGTGTTC CCATACGCCT CTTTATGCGC
AAAACGCACA ATCCCTACGC AGACCGGAAA AAGCGGTCCT GA
 
Protein sequence
MSFKVAIVGR PNVGKSTLFN RLVGKKLALV DDTPGVTRDR REGEARLGDL SFTIIDTAGL 
EEAATGTLEA RMRIGTERAI ADADLCLLLI DARAGVTPLD KSFSQILRKS PTPVILAANK
CEGGAGKAGR MEAYELGLGA PLPLSAEHGE GLGDLYDALA QFAKGLEADD AGQAVEDALA
EEQDADAGFD PDAPYEPDLE APLRVAIIGR PNVGKSTLVN QLLGEDRMLT GPEAGITRDS
IGIEWEWRGR RVKLWDTAGM RRRARVTEKL EKLSVADTLR AVRFAEVVVI LLDATQPFER
QDLHIADLVE QEGRGLLIVV NKWDMVAEPQ EVLRVLKEEL ERLLPQIRGV PIVTLSALTG
RGTDKLMPAI ERVHTFWNAR VPTARLNRWM QEAVSRHQPP AAHGRPVNLK YISQVKSRPP
TFAVFSSRAD DVPTSYRRYL VNGLRETFDL PGVPIRLFMR KTHNPYADRK KRS