Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3492 |
Symbol | |
ID | 5455168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3739166 |
End bp | 3740587 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640879077 |
Product | small GTP-binding protein |
Protein accession | YP_001414748 |
Protein GI | 154253924 |
COG category | [R] General function prediction only |
COG ID | [COG1160] Predicted GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03594] ribosome-associated GTPase EngA |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.166224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCATTCA AGGTCGCCAT TGTCGGTCGG CCCAATGTCG GCAAGTCCAC GCTGTTCAAC CGGCTCGTGG GCAAGAAGCT CGCATTGGTG GACGATACGC CGGGCGTAAC GCGCGACCGT CGCGAGGGAG AGGCGCGTCT TGGCGACCTG TCCTTCACCA TCATAGATAC GGCCGGGCTG GAAGAAGCCG CCACAGGCAC CCTTGAAGCC CGCATGCGCA TCGGTACCGA GCGTGCCATT GCCGATGCGG ATCTTTGTCT CCTGCTGATC GATGCACGCG CGGGCGTGAC GCCGCTCGAC AAGAGCTTCT CGCAAATTCT CCGCAAGTCG CCGACGCCGG TCATCCTAGC CGCCAACAAA TGCGAAGGTG GCGCGGGGAA GGCCGGCCGG ATGGAGGCTT ATGAGCTCGG CCTCGGCGCG CCGCTTCCGC TCTCGGCTGA ACATGGCGAA GGGCTCGGCG ACCTTTATGA CGCGCTCGCC CAATTCGCGA AGGGCCTCGA AGCGGACGAT GCCGGACAGG CGGTCGAGGA TGCGCTCGCC GAGGAGCAGG ATGCCGACGC AGGCTTCGAT CCGGACGCGC CCTATGAGCC GGACCTCGAA GCCCCTCTCC GTGTCGCCAT CATCGGCCGT CCCAATGTCG GCAAGTCGAC CCTCGTCAAT CAGCTTCTCG GCGAAGACCG GATGCTCACC GGCCCCGAAG CCGGTATCAC CCGCGACAGT ATCGGCATCG AATGGGAATG GCGCGGCCGC CGCGTCAAGC TCTGGGATAC TGCCGGCATG CGGCGCCGCG CCCGCGTTAC CGAAAAGCTC GAAAAGCTTT CGGTGGCGGA CACACTCCGC GCCGTCCGCT TCGCCGAGGT CGTCGTCATC CTTCTTGACG CAACGCAGCC TTTCGAGCGG CAGGACCTCC ATATCGCCGA TCTCGTGGAG CAGGAAGGCC GCGGCCTCCT GATCGTCGTC AACAAATGGG ACATGGTCGC GGAGCCGCAG GAAGTGCTTC GTGTGCTGAA GGAAGAGCTG GAGCGTCTTC TGCCGCAGAT ACGTGGCGTT CCCATCGTCA CGCTGTCGGC GCTGACGGGC AGGGGAACGG ACAAGCTCAT GCCCGCCATC GAGCGTGTGC ATACCTTCTG GAATGCGCGC GTCCCGACAG CGCGGCTCAA TCGCTGGATG CAGGAAGCCG TTTCCCGCCA CCAGCCGCCC GCCGCGCATG GCCGCCCGGT CAATCTGAAA TATATATCTC AGGTGAAGTC GCGCCCGCCC ACCTTCGCCG TCTTCTCCAG CCGCGCAGAC GACGTGCCGA CCTCCTATCG GCGCTATCTG GTGAACGGCC TGCGCGAAAC TTTCGATCTG CCGGGTGTTC CCATACGCCT CTTTATGCGC AAAACGCACA ATCCCTACGC AGACCGGAAA AAGCGGTCCT GA
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Protein sequence | MSFKVAIVGR PNVGKSTLFN RLVGKKLALV DDTPGVTRDR REGEARLGDL SFTIIDTAGL EEAATGTLEA RMRIGTERAI ADADLCLLLI DARAGVTPLD KSFSQILRKS PTPVILAANK CEGGAGKAGR MEAYELGLGA PLPLSAEHGE GLGDLYDALA QFAKGLEADD AGQAVEDALA EEQDADAGFD PDAPYEPDLE APLRVAIIGR PNVGKSTLVN QLLGEDRMLT GPEAGITRDS IGIEWEWRGR RVKLWDTAGM RRRARVTEKL EKLSVADTLR AVRFAEVVVI LLDATQPFER QDLHIADLVE QEGRGLLIVV NKWDMVAEPQ EVLRVLKEEL ERLLPQIRGV PIVTLSALTG RGTDKLMPAI ERVHTFWNAR VPTARLNRWM QEAVSRHQPP AAHGRPVNLK YISQVKSRPP TFAVFSSRAD DVPTSYRRYL VNGLRETFDL PGVPIRLFMR KTHNPYADRK KRS
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