| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3475 |
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| Symbol | |
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| ID | 5455620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3720781 |
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| End bp | 3722274 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640879060 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_001414731 |
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| Protein GI | 154253907 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.248097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA GCCAAGCCGC CTATTCACGA GAGCCCGAGG GAGACGCCGT GAGCGACTAC
CGGGTGCAGC CCCACAATAT CGACGCGGAG CAGGCGCTGC TCGGCGCGAT GCTGGTCAAC
AATGAGAGCT ACGACCGGGT GGCGAGCTTT CTGGAGCCAT CGCATTTCTT CGATGCCGTA
CACGGACGAA TTTACGAGGC GGCGGCGAAG CTCATCACGC AAGGCCACCT CGCCTCGCCC
GTGACGCTGA AGAATTTCTT CGAGCGCGAC GCGGCGCTGG CCGAGATCGG CGGCCCGCAA
TATCTCGCAA GGCTCGCGGG CGCGGCGACG ACGATCATCA ACGCGGAAGA ATATGGCCGC
ACCATCTACG AACTCGCGAT CCGCCGCGAA CTCATCAATG TCGGCACGGA AATCCACAAC
CGCGCCTATG ACGCGCCCAT CGACGACACG CCGGCGCAGC AGATCCTCGA TGCGGAGCAA
TCGCTCTACC AACTGGCCGA ACGCGGCAAA TACGAAGGCG GCTTCCAGAG CTTCCACGAG
TCGCTCAACA TCGCCATCGA CATGGCGGCG GAAGCCTTCA AGCGCGACGG CGGGCTTTCC
GGCATCTCGA CGGGATTGCG CGACCTCGAC CAGCGGCTGG GCGGCTTGCA GCCTTCCGAC
CTCCTGATCC TTGCCGGCCG CCCCTCGATG GGGAAGACCG CGCTTGCGAC CAACATCGCC
TTCTCGGCCG CGAAGAGCTA CAAGGCGGAG CACCACGCGG ACGGCACGGT GACGGCGACG
GATGGCGCCA TTGTCGGTTT CTTCTCGCTC GAAATGTCGG CCGAACAATT GGCGACGCGA
CTGCTCGCCG AACAATCGGG CGTGCCGTCG GAACGCATCC GGCGCGGCAA TATCCATGAG
GACGAATTTC ACCAGCTTGT CGACGCGGCG CGCGAGCTGC AGAGCATTCC GCTTTACATC
GACGATACGG GCGGCCTCAC CATCGCGACG GTGGCCGCCC GCGCACGCCG CCTGAAGCGG
CAGCGCGGCC TCGGGCTGCT CGTCATCGAC TATCTGCAAT TGCTGGCGGG CTCGGGAAAG
AGCGGCGAAA ACCGCGTGCA GGAAGTGACG CAGATCACGA CGGGGCTGAA GGCGCTGGCG
AAGGAGCTGA ACGTGCCGAT CCTCGCGCTG TCGCAGCTTT CGCGCCAGGT GGAAGCGCGC
GACGACAAGC GGCCGCAACT ATCGGACTTG CGCGAATCCG GCTCGATCGA GCAGGACGCC
GACGTCGTCA TGTTCGTGTT CCGCGAGGAA TATTACGTCT CGCGCCGCGA GCCGACCGAG
GGCACGCCGG AACATCTTCA GTGGCAGGAA GATATGAACA AGGTGCATGG CCTCGCCGAA
TGCATCATCG GCAAGCAGCG CCACGGGCCG ACGGGGACGG TGAAGCTGCA GTTCCAGGCG
GATGTGACGA GGTTTTCGGA TCTGGATCAG GTGCATACGG AGGGGTTCGA GTGA
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| Protein sequence | MENSQAAYSR EPEGDAVSDY RVQPHNIDAE QALLGAMLVN NESYDRVASF LEPSHFFDAV
HGRIYEAAAK LITQGHLASP VTLKNFFERD AALAEIGGPQ YLARLAGAAT TIINAEEYGR
TIYELAIRRE LINVGTEIHN RAYDAPIDDT PAQQILDAEQ SLYQLAERGK YEGGFQSFHE
SLNIAIDMAA EAFKRDGGLS GISTGLRDLD QRLGGLQPSD LLILAGRPSM GKTALATNIA
FSAAKSYKAE HHADGTVTAT DGAIVGFFSL EMSAEQLATR LLAEQSGVPS ERIRRGNIHE
DEFHQLVDAA RELQSIPLYI DDTGGLTIAT VAARARRLKR QRGLGLLVID YLQLLAGSGK
SGENRVQEVT QITTGLKALA KELNVPILAL SQLSRQVEAR DDKRPQLSDL RESGSIEQDA
DVVMFVFREE YYVSRREPTE GTPEHLQWQE DMNKVHGLAE CIIGKQRHGP TGTVKLQFQA
DVTRFSDLDQ VHTEGFE
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