Gene Plav_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3474 
Symbol 
ID5456947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3720017 
End bp3720415 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID640879059 
ProductDoxX family protein 
Protein accessionYP_001414730 
Protein GI154253906 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.418038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTTT CCAACGATAT CGTGATGCTC GCCGGCCGCG TCCTGCTCGC CGCTCTTTTC 
ATCCTCGCCG GCCTCAACAA GGCCTTGGGC GCGGAGGGCA CGATAGGCTT CATCGAATCC
AAGGGTCTGC CGCTTCCGCA GGTGATTTAT GTGCTGACTG TCGCGCTTGA GCTGGGCGGC
GGCATCCTGC TGCTGGTCGG TTTCCAGGCG CGTCTTGTCG GTCTCGCCTT CGCGGTTTTC
TGCGTGATGA CGGCGCTGAT TTTTCACCCC GGCCTGTCGG ATCCGTCCTT CCTGAAGAAC
CTCGCGCTCG CCGGCGGCTT CCTTTATGTC TTCGCCTTCG GCGCCGGTGC CTACAGCATA
GACGGCAGGC GCGGCGCGCC GGCAGTCGCT GCGGCATAA
 
Protein sequence
MKVSNDIVML AGRVLLAALF ILAGLNKALG AEGTIGFIES KGLPLPQVIY VLTVALELGG 
GILLLVGFQA RLVGLAFAVF CVMTALIFHP GLSDPSFLKN LALAGGFLYV FAFGAGAYSI
DGRRGAPAVA AA