| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3467 |
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| Symbol | |
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| ID | 5456932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3712125 |
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| End bp | 3714029 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640879052 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001414723 |
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| Protein GI | 154253899 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAGCGGG AAGCGAGAAT ACCCCGAAAG CGCGCCAGGG AGCCTTTGTG GAAGGGGCGC
AAGAGCCGAC TCGTCCTTTT GACCGGCGCC CTCTTCGCAC TTGCCTTCGC GATGGCGCAG
ATCTTTCCCG AACGGGAACA ATGGCTTTAT TCGGGCGCCG CGCTTTTAAG CGTCATTCCC
TTTGCGAGGC GCGCTGTTGC CGGAGCAATG TCCGGCTCGC CTTTTACTAT CGAGACGCTG
ATGACGATTG CGGTGCTCGG TGCGGTCGTC ATCGGAGAGG CCGAGGAAGC TGCCGTCGTC
ATTTTCCTGT TCGCGGTCGG AGAGCTGCTC GAAACCGTCG CGGCCGGCCG GGCGCGAGCG
GGCATCAAGG CGCTGATCGA CCTCGTGCCG CGCGTGGCGT TTTGCGAGCG TAACGGCACG
GTCGAAAAAG TCGCGGCGGA AGATCTGGTT GTTGGCGATG TCGTCGTAGT GCGGCCCGGC
GACCGTGTTC CTTCCGACGG CACGGTGATC GACGGCATAT CGGAGGTCGA CGAAGCGCCA
GTGACCGGCG AGTCCGTGCA GGCACTCAAG AAAGCAGGTT CGACGGTCTA TGCCGGCAGC
ATCAACGCCA ATGGCGAGCT GCGTGTCTCG ATCGACCGTG TCACGTCCGA CAACACGATT
ACACGCATCA TCCACATGGT TGAGAAAGCC CAGGAATCAA AGGCGCCGAC CGCGCGCCTG
ATCGACCGCT TCAGCCGGTG GTATACGCCG GGTGCAATGG TTGTGGCGGC TCTGATCGTC
ATGGTTCCAC CACTCGCCTT TGACGGCGAC TGGATGACGT GGACCTATCG GGGACTTGCC
ACGCTGCTGA TCGCCTGCCC CTGCGCACTC GTCATCTCGA CGCCCGCGGC AATCGCCTCG
GGCCTTGCCG CCGGAGCGCG GCGGGGATTG TTGATCAAGG GGGGTGCGGC GCTCGAAACG
CTTGGCAAGG TCAGGACCGT TGCTTTCGAC AAGACCGGAA CGCTGACACG CGGCTGCCCG
CAGGTAACGG ATGTCGTGCC GGTCATGGGT AGTGAAGATT CGGTGTTGGC GGTAGCGGCA
GCGGTCGAGC GCAACACCAG TCACCCGCTC GGTCGCGCGA TCGTCGAGGT GGCGGTGATG
CGCGGGCTGG ACATGCCGGC TACCTTCGGC GGCGGCACCG CAACACCTGG CAAGGCAGTG
ACGGTGCGGC TAGAAACCGG CTTTGCTTCT GTCGGTTCAC CCCGTTATGC TGCGGAGCAG
ACTGCCATCG CCGCCGAGGT CGCAGAGAAG ATCGCGACGC TGGAAAGCGA GGGCAAGACG
GTTGTCGTGC TCCTGTCGGA AAAAGCCGTC GAGGGATTGA TTGCACTTCG CGACGAACCG
CGTGAAGACG CGATGGAGGG CGTGAAGAGG CTGACGGAGC GTGGCATCCG TGCCTTGATG
CTGACCGGCG ACAACCTGCG CACGGCCAAC GCCATTGCGG GTCACCTCGG CATGGAGGCG
AGTGCCGAGC TTCTGCCGGA CGCCAAGCTC GCCGAAATCA GCCGGCTTAA AGAGGATGGC
CCTGTCGTCA TGGTGGGAGA CGGCATCAAT GACGCGCCCG CGCTCGCTGC GGCCTCGGTC
GGCGTTGCCA TGGGTGTCGG CACCGATGTC GCGCTGGAGA CGGCGGACGC CGCACTCCTG
AAAAATCGGG TAACGGGCGT CGCCGATCTC ATCGACCTGT CGCAGGCGAC CCTTGGCAAC
ATCCGGCAGA ACATCGCAAT CGCGCTGGGA TTGAAGGCCG TCTTCCTCGC AACGACTCTT
CTCGGCGTCA CAACGTTGTG GATGGCGATC CTCGCGGATA CGGGTGCTAC TGTGCTTGTT
ACAGCCAACG CGCTGCGTCT TCTTGTTCGC GAGCCATCGA AATAG
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| Protein sequence | MEREARIPRK RAREPLWKGR KSRLVLLTGA LFALAFAMAQ IFPEREQWLY SGAALLSVIP
FARRAVAGAM SGSPFTIETL MTIAVLGAVV IGEAEEAAVV IFLFAVGELL ETVAAGRARA
GIKALIDLVP RVAFCERNGT VEKVAAEDLV VGDVVVVRPG DRVPSDGTVI DGISEVDEAP
VTGESVQALK KAGSTVYAGS INANGELRVS IDRVTSDNTI TRIIHMVEKA QESKAPTARL
IDRFSRWYTP GAMVVAALIV MVPPLAFDGD WMTWTYRGLA TLLIACPCAL VISTPAAIAS
GLAAGARRGL LIKGGAALET LGKVRTVAFD KTGTLTRGCP QVTDVVPVMG SEDSVLAVAA
AVERNTSHPL GRAIVEVAVM RGLDMPATFG GGTATPGKAV TVRLETGFAS VGSPRYAAEQ
TAIAAEVAEK IATLESEGKT VVVLLSEKAV EGLIALRDEP REDAMEGVKR LTERGIRALM
LTGDNLRTAN AIAGHLGMEA SAELLPDAKL AEISRLKEDG PVVMVGDGIN DAPALAAASV
GVAMGVGTDV ALETADAALL KNRVTGVADL IDLSQATLGN IRQNIAIALG LKAVFLATTL
LGVTTLWMAI LADTGATVLV TANALRLLVR EPSK
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