| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3460 |
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| Symbol | |
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| ID | 5455914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3703756 |
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| End bp | 3705114 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640879046 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001414717 |
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| Protein GI | 154253893 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.857931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCAT TGACCAGCCT GGGTGGTGCC GGCACCGTCA CCGGCTCCAA GCACCTTATC
ACCCATGGCA ATACCCGCAT CCTGATCGAC TGCGGACTGT TCCAGGGATT GAAAAACCTG
CGCGAACTTA ATTGGCAGCG CCTGGCCGTT GAACCCAAGG ACATCGATGC GGTCGTACTG
ACGCATGCGC ACCTGGATCA TTGTGGGTAT CTGCCCCGAT TGGTGCTGGA CGGGTTCCGC
GGGAAGATTT TCTCGACCTC AGCCACGCGA GATGTCGCCG AACTCATCCT GCTCGACAGT
GCCTGGTTGC AAGAGAAGGA CGCCGAGTTC GCCAATCGAA AAGGATTTTC CAAACACAAG
CCAGCCCTTC CGCTGTATCG GGTTCGGGAT GCAGAACGTG CGCTCCTGCA GTTCAAACCG
GTGCCGCTGC ATCAAGAGAC GGAATTGCCG GGCAATGCCC GTCTACTGCT GCGCAGCGCT
GGTCACATTC TTGGGGCGGC GACGGTTCAG ATCGACATTG GCGGCAAGCG TTTGGTGTTC
TCCGGCGACC TGGGGCGCTA TGACGATGTG GTCATGCCTG ATCCTGAACC CGTCACGGCA
GCGGACTACA TCATCATCGA GTCCACCTAT GGCAATCGTC GTCATGACCG TTCCGATGCC
GTCGAAGCGC TGGGCGACAT CATCGAGCGC ACGACTCGCC GCGGAGGCAC CGTAGTGATT
CCCGCTTTTG CCGTTGGACG CGCGCAGTCG TTGATCTATG ACCTATGGCT GTTGCGACAG
CGCGGTCGGC TCCGCACCGT GCCCGTCTAT CTGGACAGTC CCATGGCCAC CAGCGCAACT
GCGCTGCTGC ACCGCCATGC CGACGACCAC AAGCTCGCAC AACACGATTT CGAGGCGGCA
TTCTCAGAAG TCACATACAT GCGCGACGTT GAAGAGTCCA AGGCGCTATC GGCGAATCGC
TACCCCAAGG TGATTATTTC CGCCAGCGGC ATGGCCACCG GTGGCCGCGT GCTGCATCAC
ATAGAAGCGT TTGGCGGCAG TCATCAGAAC ACGCTGCTGT TCTCTGGATT CCAGGCAGCA
GGTACGCGCG GACGCAAGCT GCTTGAGGGC GCTCGCGAAG TCAAAATTCA TGGGCGCTGG
ATGCCGATCA AGGCGGAGGT CGCCGAGCTT GCGATGTTGT CGGCTCATGC CGACAGCGAT
GAACTGATGC GTTGGCTGGG CGGCTTTACC CGGGCGCCGG AAGGGGTGTT CATTGTTCAT
GGTGAATCCA ATGCCTCCGA GGCGCTGCGC GAACGTATTC AGCGCGAACT CAAATGGCAC
GCATCGGTGC CCATGCAAAA CCAGGAGTTC GCCCTGTGA
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| Protein sequence | MLSLTSLGGA GTVTGSKHLI THGNTRILID CGLFQGLKNL RELNWQRLAV EPKDIDAVVL
THAHLDHCGY LPRLVLDGFR GKIFSTSATR DVAELILLDS AWLQEKDAEF ANRKGFSKHK
PALPLYRVRD AERALLQFKP VPLHQETELP GNARLLLRSA GHILGAATVQ IDIGGKRLVF
SGDLGRYDDV VMPDPEPVTA ADYIIIESTY GNRRHDRSDA VEALGDIIER TTRRGGTVVI
PAFAVGRAQS LIYDLWLLRQ RGRLRTVPVY LDSPMATSAT ALLHRHADDH KLAQHDFEAA
FSEVTYMRDV EESKALSANR YPKVIISASG MATGGRVLHH IEAFGGSHQN TLLFSGFQAA
GTRGRKLLEG AREVKIHGRW MPIKAEVAEL AMLSAHADSD ELMRWLGGFT RAPEGVFIVH
GESNASEALR ERIQRELKWH ASVPMQNQEF AL
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