| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3459 |
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| Symbol | |
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| ID | 5455394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3701342 |
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| End bp | 3703720 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879045 |
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| Product | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase |
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| Protein accession | YP_001414716 |
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| Protein GI | 154253892 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.165216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC AAGCTAACCT CGCAACCGAT TGGCGTGCTG GTTACGGGCC CATCGCGCAC
AGGTCTGAAA CCATCGAACG TATGCAGGCC CTAGTGCAAC GTCTGGTCGC GCAAAGGCGT
ATAGCAGACG AAGCCTCGGC CCATGCGCTG CTGGCTGCAG CCGACCGGGT GGCCTGCACG
GCCATGAGCG TAGTGGCGCA TATGACCTAT GCCCGGCGCA TCGACCGAAG CGGCTGCCCA
CTGGGCTCCG ATGATTTCAA ACAAACGCCC GAAGGCCACA CCGGCGGCTC GCTCAACATG
GTGCCAGCCT TCGTGGGTTA TCTGTTGGCC AACGCGCTGA CCGGGACGAC ACGCGGCTGG
CTCATGGGGC AGGGGCACTG CGTGGCCGCG ATCGAGGCGG TGAACGCACT GACCGGCGAT
GTATCCGCCG CCCAGCGTGG ACGCTACGAC CGCAGCGAGG CGGGCCTGTC GCTCCTCATC
GCGGACTTCT ACTCCTATGC CATCGATAAG CAGGGTCGGC CCGCGGTACC GCTGGGTAGC
CATGCCGGGC CGAACACGGC CGGCGCGATC TCCGAAGGCG GCTATCTGGG GTTCGCCGGG
CTGCAGTATG TGCACACGCC GTTGCCGGGA GAAAGCCTGG TGGCATTCCT CAGTGATGGC
GCTTTCGAGG AACAACGTGG CTCGGACTGG GCGCCGCGCT GGTGGCGCGC CGAGGACTGC
GGCTTCGCCA TCCCGGTCAT GATTCTCAAC GGACGGCGCA TCGAGCAGCG CACCCAGATC
GTGCAGGAAG GTGGCGCTGC CTGGCTGGCC GAAGACCTGC GCCACAACGG CTTCGATCCC
GTCATCGTCG ATGGACGCGA TCCAGTGGCG ATCGCATGGG CCATTGTTGA AGCCGAAGAC
ACGCTGAGCG CCTTCGCTGC ACGCTCGGAT CGGCGCTATC CGGTCAAGCT GCCTTACGTG
ATCGCCGAGA CGGAGAAAGG TTTTGGCTTC CCGGGCGCGG CGACCAATGC CGCCCACAAC
CTGCCGCTGA ACGGCAATCC GCGCGAGGAT GCGCAGGCAC GCGAGGCCTT CAACGCAGGG
GCTGCGGCGC TGTTCGTGCC TGAGAGCGAA CTGGCAAACG CGTTCACCGT CCTGGCGAAT
CACGGCCAGA GCCAGCGCTC GCGCGAAAGC GAGCACCCCA TGGCCCGACG CCATCCAGCG
AGCCCTCATC TGCCGATGCC GGCCTGGGTG CCAACCGAGG TGTCGGGCAG CGCCATGTCC
GCACTGGACC GTTGGTTCGT GGAGCTAGTG CAGGCAAATC CACAGTTGCG CATCCGGATC
GGCAATCCCG ATGAACTGGC CAGCAACAAG ATGGGTGCCA CGCTGGCGCT GCTCAGGCAC
CGCGTCAACG TGCCCGAACC CGGCGCCCCG GAATCGACGG ATGGCTCGGT GGTCACCGCA
CTCAATGAAG AAGCCGTTGC GGCCGCCGCC CTCGCCAACA AAGGGGGGCT GAACCTGATC
GTCAGCTACG AGGCCTTCGC GGTCAAGATG CTTGGATTGA TGCGCCAGGA GATCATCTTC
GCGCGTCGGC AGAAGGAACT GGGCCAGCCG CCAGGCTGGA TCTCCGTCCC GCTGATCGTC
ACATCCCACA CCTGGGAGAA CAGCAAGAAC GAGCAGTCAC ACCAGGACCC GACCATTGGC
GAAGCATTGC TGGGGGAGAT GTCGGACACC GCACGCGTGT TGTTCCCGGT GGATGCCAAC
ACGGCGTGCG CCGCGCTGCG AGCGGTCTAC GCCAGCCGGG GCCAAGTGGC TTGTGTTGTG
GTCTCCAAGC GCGACACGCC GAATCACTTC AATGCCGCCG CCGCTCAATC GCTGATCGAG
CACGGCGCAG CCCATGTAGC CGGCGATCCG GCTACAGCAC AACTGCAGTT CGTGGCGATT
GGCGCCTACC AGTTGGAGGA AGCGCTCAAA GCCCACGCCC GCCTGGGGCA CCATGGGTTT
ACGTCGTGCG TCACCGTGGC GATCGAGCCC GGCCGTCTGC GCATTCCACG AGACGACCTT
GAGGCCGCCT TCGTGCTCGG TGACGAAGCA CTGCAAGCGC TCTTCCCGCC TCACCTGCCG
CGCGTGTTGA TGAGCCATAC CCGCCCTGAG CCGATGCTGG GCGTGCTGCG CCGCATTGAC
AGCGGCCCCT CGAAGACGCG GGCTTTGGGC TACATCAACC GCGGCGGCAC ACTCGATGTG
GCTGGAATGC TGATCGCCAA CCGCTGCACC TGGGCGGACG CCATCTATGC GGCTGCGCAA
GTGACCGGCT GGAACAGTTC GCAGGTTGCT GCGGCCGCGA CCGACGCGCG AATTTCAAGT
GGTTCTGACG CGGTCCGCGG CGACCGCGCC GGTTCCTGA
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| Protein sequence | MSSQANLATD WRAGYGPIAH RSETIERMQA LVQRLVAQRR IADEASAHAL LAAADRVACT
AMSVVAHMTY ARRIDRSGCP LGSDDFKQTP EGHTGGSLNM VPAFVGYLLA NALTGTTRGW
LMGQGHCVAA IEAVNALTGD VSAAQRGRYD RSEAGLSLLI ADFYSYAIDK QGRPAVPLGS
HAGPNTAGAI SEGGYLGFAG LQYVHTPLPG ESLVAFLSDG AFEEQRGSDW APRWWRAEDC
GFAIPVMILN GRRIEQRTQI VQEGGAAWLA EDLRHNGFDP VIVDGRDPVA IAWAIVEAED
TLSAFAARSD RRYPVKLPYV IAETEKGFGF PGAATNAAHN LPLNGNPRED AQAREAFNAG
AAALFVPESE LANAFTVLAN HGQSQRSRES EHPMARRHPA SPHLPMPAWV PTEVSGSAMS
ALDRWFVELV QANPQLRIRI GNPDELASNK MGATLALLRH RVNVPEPGAP ESTDGSVVTA
LNEEAVAAAA LANKGGLNLI VSYEAFAVKM LGLMRQEIIF ARRQKELGQP PGWISVPLIV
TSHTWENSKN EQSHQDPTIG EALLGEMSDT ARVLFPVDAN TACAALRAVY ASRGQVACVV
VSKRDTPNHF NAAAAQSLIE HGAAHVAGDP ATAQLQFVAI GAYQLEEALK AHARLGHHGF
TSCVTVAIEP GRLRIPRDDL EAAFVLGDEA LQALFPPHLP RVLMSHTRPE PMLGVLRRID
SGPSKTRALG YINRGGTLDV AGMLIANRCT WADAIYAAAQ VTGWNSSQVA AAATDARISS
GSDAVRGDRA GS
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