| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3455 |
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| Symbol | |
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| ID | 5455975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3696801 |
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| End bp | 3698552 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640879041 |
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| Product | poly-beta-hydroxybutyrate polymerase domain-containing protein |
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| Protein accession | YP_001414712 |
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| Protein GI | 154253888 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.35365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.806898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAAAAA ATAAGAAAGG TAATACTTCA TCGACAATCG TTCCGGCACT GGATATGCAA
GCGCATATGG CTTGGGCCCA GGCTTGGTCC TCAATTTCAC CTGAATCGTC GCTGTTGGCT
TGGACTGATT GGGCAAGCCA TTTAGCGAAC AGCCCCGGAA AGCAATCGGA GCTTTTGGCT
TTTGCAGGCT CCTTGTCTGA GCAATGGATG TCTCTGCTGA AAAAGAGCTT GGTCAGTCCG
GACCAGGAAG TTGCATCTCC TGAACCATCA CCTACCAATG ACCGTCGTTT CAACGATCCG
GCATGGGATC AATGGCCCTA CAACCTTTTC CGCAGTTCCT TTCTTATTCA ATCCAAATGG
TGGGAGCAAG CCACGCAAGG TGTATGGGGT GTTGATCCAC AACACGAACG CCTATTGGCG
TTTGGCGCAA AGCAATGGCT GGAAATGGTA TCGCCGACCA ATTCTGCGCT TTTTAACCCC
GTTGTCCTGA AAAAAACGAT AGAAGAACAA GGCGCCAACC TGGCGCGTGG CATGTCCAAC
TTTCTCGATG ACCTGCGCCG ACAACTATCC GGTGAGCCTC CTGCGGGAAC CGAGAACTTC
GTCGTTGGGC GCGACGTGGC GGTGACGGAA GGAAAAGTCG TACTGAGGAA TCAATTAATC
GAGTTGATTC AATACACGCC CACTACCGAG AAAGTCCATC CTGAGCCGAT ACTGATCATT
CCTGCCTGGA TCATGAAGTA CTACGTACTC GATCTATCTC CCCATAACTC GCTGATACGG
TATCTGGTTG CGCAAGGCCA TACGGTTTTT TGCATCTCCT GGAAAAATCC GGATGCTGGT
GATCGAGACT TGGGCATGGA TGAGTATCTT GAGTTCGGCT TGCGTGCGGC GCTGGACGCC
GTGACATCCA TCGTCCCCGA GCAGGGAATC CACGCGGCTG GTTATTGCCT GGGCGGAACG
CTACTGGCCA TTGGTGCTTC AGCCATGGCG CGTGATGGCG ATACGCGGCT GGTGTCGGTA
AGCCTGCTTG CCGCACAGAC GGACTTCAGC GAACCGGGCG AGCTGAGTCT TTTCATCAAC
GAGAGTCAAG TGGCGCTGTT GGAAGCCAGC ATGGCTCAAA CCGGTTATTT GACCTCCGAC
CAGATGAGCG GAGCTTTTCA GCTACTGCGC TCCTACGATC TCATATGGTC TCGCATGATT
GACGAATACC TATTGGGCGA TCGCCGGCCA ATGACCGACC TGATGGCTTG GAATGCCGAT
GGGACTCGCC TGCCCGCGAA GATGCATTCG CAGTATCTCC GACGCCTTTA CCTGAATAAC
GATCTCAGCG CGGGGCGTTA TCCCGTCACG GGTCGCCCCG TTTCAGTGGG AGACATCGCT
GTGCCGGTGT TTTGCGTCGG CACTGCCTCG GATCATATTG CGCCTTGGCG CTCGGTTTAC
AAGCTGCATC TCCTGTCTTC GGCCGAGCTG ACTTTCGTGC TGACCACTGG AGGACACAAC
GGCGGCATCG TCAGCGAGCC CGGCCGAGGT AAGCGCCAAT ATCAAATCCA TACCCGCGCG
GCCGGTGATG GATACATGGC GCCGGACGAG TGGCAAGCCA CTGCACAGAC GCATCTAGAT
TCGTGGTGGC CGGCATGGTC AGCATGGCTT CGAGAGCGCT CTGGTGAAGG TGTTGCGCCT
CCGCTCATGG GGGCCGAATC CCGTGGATAT CCCACTATTT GCGACGCCCC GGGGAAATAT
GTACGCAGCT GA
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| Protein sequence | MTKNKKGNTS STIVPALDMQ AHMAWAQAWS SISPESSLLA WTDWASHLAN SPGKQSELLA
FAGSLSEQWM SLLKKSLVSP DQEVASPEPS PTNDRRFNDP AWDQWPYNLF RSSFLIQSKW
WEQATQGVWG VDPQHERLLA FGAKQWLEMV SPTNSALFNP VVLKKTIEEQ GANLARGMSN
FLDDLRRQLS GEPPAGTENF VVGRDVAVTE GKVVLRNQLI ELIQYTPTTE KVHPEPILII
PAWIMKYYVL DLSPHNSLIR YLVAQGHTVF CISWKNPDAG DRDLGMDEYL EFGLRAALDA
VTSIVPEQGI HAAGYCLGGT LLAIGASAMA RDGDTRLVSV SLLAAQTDFS EPGELSLFIN
ESQVALLEAS MAQTGYLTSD QMSGAFQLLR SYDLIWSRMI DEYLLGDRRP MTDLMAWNAD
GTRLPAKMHS QYLRRLYLNN DLSAGRYPVT GRPVSVGDIA VPVFCVGTAS DHIAPWRSVY
KLHLLSSAEL TFVLTTGGHN GGIVSEPGRG KRQYQIHTRA AGDGYMAPDE WQATAQTHLD
SWWPAWSAWL RERSGEGVAP PLMGAESRGY PTICDAPGKY VRS
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