Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3454 |
Symbol | |
ID | 5456026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3695415 |
End bp | 3696620 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879040 |
Product | sodium/glutamate symporter |
Protein accession | YP_001414711 |
Protein GI | 154253887 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.890755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.830149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG ATGCCTTCCA TGGATTCACG CTCGCCATCG TGCTGTTGTT CGTGGGCAAG GGCCTGGTTG CGCGTTGGGG CATCTTGCGT CGATACAGCA TCCCGGAATC CCTGGTGGGC GGCCTGGCCT GCGCCCTGGT TGTCTTCGCC CTGTACTACG GTGCGGGGAT CGTCGTCAGT TTCGATCTCG AAGCGCGTGA CGCGCTGCTG CTGTACTTCT TTGCGGCCAT TGGCCTGAGT ACCGACGCCC GCACGCTGCG CCATGGTGGG CGGCCCTTGC TGATCCTGTC GGGGTTGGCC ATCGGGTTCA TGGTGCTGCA GAACCTGGCC GGGATGGAGA TGGCACGCGC CTTCGGCCTG GATCCGCGCG CCGGGCTGAT GGTGGGATCG ATTTCCCTGA CCGGAGGCGT GGGCACCACC TTGGCCTGGT CCGATCACTT CGTTCAAAAC CTCGGCATTG CGCAAGCGCA GGAACTGGGA TTGGCAGCGA ACATGATCGG CCTGATCGCG GCCTGCACCA TCGGTGGCCC GATCGCAAGC CTACTCATGC GCAGATATCA ACTTCGAGCC TCCGGGGACA GCACACTGGA GATTGGCACG CTGCACAGCG ATGAACAGCA TGCCCGTCTG GACTACTACG GTGTGCTATT GGCATTGCTC TGGCTCAACT TAGCCTTGAT GTTGGGCTCC GGAGTCAATG CCTTGGTCGC GCTTACCCCT GTCACGCTAC CCGCCTTTGT GGGCTGCCTG CTGGCCGGCA TTCTCCTGCG CATGATTGGC GACTGGATGA GGCCGAGTGG GCGCGGGCGT CTATGGAACT GGCCGAGCAT GCAGCCGGGC ATCGCTTTGA TCTCCGACAT GTCATTGGGC CTGTTTCTGA CCATGGCGCT GATGGGCCTC AGACTCTGGG AGCTGCAGCC TGTGCTTGCC TTCATCACCG TGGCAATGCT GGTGCAGATC ATCCTGGTCA TCGCATTCGT GCTTCTGATC GTTTTTCGGG CAATGGGCAG GGATTACCAA GCCGCAGTGA TGTGCGCCGG TTTCGGCGGA ATCGCGCTGG GCTCTACCGC CACCGCCATC GCCAACATGA CGGCGATCAC TCGGGAGCAT GGCGCTGCGC GCGAGGCGTT CATTGTGGTG CCCCTGGTGT GCGGGTTCGT CATCGACATT GCGAACGCGC TGGTGATCAG CCTGATGGCC GGTTAA
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Protein sequence | MKIDAFHGFT LAIVLLFVGK GLVARWGILR RYSIPESLVG GLACALVVFA LYYGAGIVVS FDLEARDALL LYFFAAIGLS TDARTLRHGG RPLLILSGLA IGFMVLQNLA GMEMARAFGL DPRAGLMVGS ISLTGGVGTT LAWSDHFVQN LGIAQAQELG LAANMIGLIA ACTIGGPIAS LLMRRYQLRA SGDSTLEIGT LHSDEQHARL DYYGVLLALL WLNLALMLGS GVNALVALTP VTLPAFVGCL LAGILLRMIG DWMRPSGRGR LWNWPSMQPG IALISDMSLG LFLTMALMGL RLWELQPVLA FITVAMLVQI ILVIAFVLLI VFRAMGRDYQ AAVMCAGFGG IALGSTATAI ANMTAITREH GAAREAFIVV PLVCGFVIDI ANALVISLMA G
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