Gene Plav_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3453 
Symbol 
ID5455397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3694180 
End bp3695418 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content64% 
IMG OID640879039 
Productacetate kinase 
Protein accessionYP_001414710 
Protein GI154253886 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.698429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA CCATGGCCCG CTCCGGGCGC CGCGAACACG GACTGATCCT TGTGCTGAAC 
TGCGGTTCAT CCAGCATCAA GTTTGCGGTG TTCGATTCCT CGGCCGCGCC ACTGCCGCGT
CAGGCATTGT GGAATGGCAA GGTGCAGGGA ATCGGCGGCG CCAACCCGGA TTTCGGAGAG
ACCGGAGTTG CGCCGTTCTC GATCGAACTG GACACGGCAC ATCCGTATCG CGCCGCACTG
CGCATCATCC GCGATCGCGT CAGTCAGCGG CTCGACGGCC GCCGGATAGG TGCGGTCGCT
CATCGGATCG TCCACGGTGG CAGCAGGTAT TTCGAGCCAG TGCGGGTGGA CGCCCAGGTG
CTCACCGATC TGCAGGGATA CATCCCGCTG GCGCCACTGC ACCAGCCGTT CGCGCTGGAA
GCCATCGATA TTCTGCTGCG CGAACAGCCG GAGCTGCCTC AGGTGGCCTG CTTCGACACC
GGCTTCCATC ACACCATCCC CAAGCTCGAG CAGCTCCTGC CGTTGCCCTA CGCCGCATGG
GAGCGCGGTC TGCGCCGGTA CGGATTTCAC GGCCTGTCGT ATGAGTACAT GGCTGAGGCT
TTGCCCGAAC GCCATGGCGA CGCGGCGCGC AGGCGCACCA TCGTTGCCCA CCTGGGCAGT
GGCGCCAGCC TGTGTGCTAT GCAAGGACTC AAAAGCGTGG CCACCACCAT GGGTTTCTCC
GCGCTTGACG GGCTGATGAT GGGCACCCGC ACCGGTGCGC TCGATCCAGG CGCCGTGCTC
TACCTGATGG AGATCGAGAA GCTTTCACTG GAACAAGTGG GGCGTGTCCT CTATCACGAG
TCCGGTCTGC TCGGCGTTTC GGGAATCTCG GCCGAGCCGC GCGTCATTGT CCGGCACGAG
AACGATGCAG GCGAAACGGG GGAGCGAGCG CGCTTGGCAC TGGCCCTTTA CGTGCGACGC
ATCGTGCGCG AGATCGGGGC CCTGGTCGCC GTGCTGGGCG GTCTGGACAT GTTGGTGTTC
ACGGCGGGTG TCGGTGAACA CAATGCGTTC ATTCGCGAGC GCATCTGTGC GGCGCTGGGC
TTTCTGGGCA TTGCCCTGGA TACCGACGCC AACGCCCGCC ACGCGGCGAA GATTTCCAGC
GACCACAGCC AGGTCATCGT GGCGGTCGAG CCCACCAACG AAGAGTGGAT AGCCGCCAGC
CACGCACTGT CCTGCCTGGA CAGGGAGAAG GTGCGATGA
 
Protein sequence
MDVTMARSGR REHGLILVLN CGSSSIKFAV FDSSAAPLPR QALWNGKVQG IGGANPDFGE 
TGVAPFSIEL DTAHPYRAAL RIIRDRVSQR LDGRRIGAVA HRIVHGGSRY FEPVRVDAQV
LTDLQGYIPL APLHQPFALE AIDILLREQP ELPQVACFDT GFHHTIPKLE QLLPLPYAAW
ERGLRRYGFH GLSYEYMAEA LPERHGDAAR RRTIVAHLGS GASLCAMQGL KSVATTMGFS
ALDGLMMGTR TGALDPGAVL YLMEIEKLSL EQVGRVLYHE SGLLGVSGIS AEPRVIVRHE
NDAGETGERA RLALALYVRR IVREIGALVA VLGGLDMLVF TAGVGEHNAF IRERICAALG
FLGIALDTDA NARHAAKISS DHSQVIVAVE PTNEEWIAAS HALSCLDREK VR