Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3449 |
Symbol | |
ID | 5456178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3688550 |
End bp | 3689296 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640879035 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001414706 |
Protein GI | 154253882 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0871838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCTG AACAACGCAC CGCCCTGGTC ACGGGCGGCA ACGGTGGCCT GGGCGCGGCC ATCGCCCGAG CCTTGCACGA TGCTGGGCAT ACCGTGCTCG TCATCCACTC GCCAGGCAAT GCCAGCATCG GCGCGTGGTT GGAAGCCCAG GCGGGTGAAG GTTACAACTT CATCGCCTAC GGCGCGGATG TGGCCGACCA TGCCTCCTGC CAGGAGCTGG CCGGCCTCAT TCAAGCAGAC GGTCACCACA TCGACATTCT GGTCAACAAC GCGGGCATCA CGCGTGATGC TACGTTCCGC AAGCTGAGCT ACGCCGATTG GGATGCGGTT CTGCGCGTCA ATCTCGACTC CGTTTTCAAC GTCACTCGGC CATTCATTGA CGGCATGCTC GAAAGGGGCT GGGGCAGGAT CATCAACATC TCCTCCATCA ACGGCTCGAA GGGGCAGTTC GGCCAAACCA ACTACTCCGC CGCGAAAGCC GGGATGCATG GATTCACCAA AGCCCTCGCG CAGGAGGTGG CGCGCAAGGG CGTGACGGTC AACACCGTCT CGCCGGGGTA TCTGGATACG AAGATGGTGA CGAGCATGTC GGAGGAAGTG GTCAAGCAGG TGGTTGCCGG TATTCCCGTG GGTCGTCTGG GACGGCCTGA GGAAATCGCC GCACTGGTTG CATTCATCGC CAGCGAGTCT GCGGGGTTCA TGACCGGCAG CAATGCGTCG ATGAATGGTG GCCAGCACAT GTACTGA
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Protein sequence | MPAEQRTALV TGGNGGLGAA IARALHDAGH TVLVIHSPGN ASIGAWLEAQ AGEGYNFIAY GADVADHASC QELAGLIQAD GHHIDILVNN AGITRDATFR KLSYADWDAV LRVNLDSVFN VTRPFIDGML ERGWGRIINI SSINGSKGQF GQTNYSAAKA GMHGFTKALA QEVARKGVTV NTVSPGYLDT KMVTSMSEEV VKQVVAGIPV GRLGRPEEIA ALVAFIASES AGFMTGSNAS MNGGQHMY
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