| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3447 |
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| Symbol | |
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| ID | 5456210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3686921 |
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| End bp | 3688051 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640879033 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001414704 |
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| Protein GI | 154253880 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0565648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGAA GAAACCTGGC CAACATCTAC GACCTGGGTG TCAAGGAGCT GTGGAGTCTT
TGGCGCGATC CGATGATGCT CGTGCTCATC CTCTATGTGT TCACCGCATC GGTCTACACC
TCAGCGACCT CCATGCCGGA GACGCTGCAC AACGCGCCCA TCGCCATCAT CGACGAGGAT
AATTCGGCCC TGTCCCAGCG GATTGCTTCG GCCTTCTACC CCCCGCAGTT CACCCAGCCG
GCCATGATCG ACTATAGAGA CGTGGACCCG GGCATGGACG CGGGGCTGTA CACCTTCGCC
CTGGTTATTC CGCCCAACTT CCAGCGTGAC GTGCTGGCGG GGCGATCGCC CGCCGCGCAG
CTCAATGTCG ATGCCACCCG AATGAGTCAA GCCTTCACCG GCAGTGGCTA TATCCAGCAG
ATCTTCACCG GTGAAGTCAA TGAGTTCGTC AAGCGTTACC GCGGCACCGA CGCGCCACCC
GTGGATCTGG CCTTGCGCGC ACGCTTCAAC CCCGCACTGG ACAAGGCCTG GTTCGGCTCG
GTGGTGCAGA TCATCAACCA CATCACGCTG TTGTCCATCA TCCTCACCGG CGCGGCGCTG
ATCCGGGAGC GCGAGCACGG CACTATCGAG CATCTGCTGG TGATGCCGGT CACGCCCGCG
CAGATCATGC TCTCCAAGGT CTGGTCGATG GCCCTGGTCG TGCTGATCGC CTCCTTCCTG
TCCCTCAATC TCATGGTGCG CGGCGTCCTG GGCGTTCCCG TCGAGGGTTC CATTGCGCTG
TTCTTCGCTG GCGCGGCGCT CAGTCTGTTC GCCACCACCT CGATGGGCAT CTTCATCGCC
ACCCTGGCGC GCAACATGCC CCAATTCGGC ATGTTGATGA TGCTCACCAT CATGCCGCTG
CAGATGCTCT CGGGTGGCAC CACGCCACGC GAAAGCATGC CCGAGATAGT GCAGAACATC
ATGCTGATCG CACCCACCAC CCATTTCGTG GAACTGAGCC AGGCTATCCT CTACCGGGGC
GCCGGCCTGG AGACGGTGTG GCAGCCCTTC CTGGCGCTGG CACTGATCGG CACAGTTCTG
TTTTTCCTGT CGTTAGCACG CTTTCGCAAA ACGATCGGCC AGATGGCCTG A
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| Protein sequence | MRRRNLANIY DLGVKELWSL WRDPMMLVLI LYVFTASVYT SATSMPETLH NAPIAIIDED
NSALSQRIAS AFYPPQFTQP AMIDYRDVDP GMDAGLYTFA LVIPPNFQRD VLAGRSPAAQ
LNVDATRMSQ AFTGSGYIQQ IFTGEVNEFV KRYRGTDAPP VDLALRARFN PALDKAWFGS
VVQIINHITL LSIILTGAAL IREREHGTIE HLLVMPVTPA QIMLSKVWSM ALVVLIASFL
SLNLMVRGVL GVPVEGSIAL FFAGAALSLF ATTSMGIFIA TLARNMPQFG MLMMLTIMPL
QMLSGGTTPR ESMPEIVQNI MLIAPTTHFV ELSQAILYRG AGLETVWQPF LALALIGTVL
FFLSLARFRK TIGQMA
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