| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3440 |
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| Symbol | |
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| ID | 5456509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3675607 |
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| End bp | 3677208 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640879027 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001414698 |
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| Protein GI | 154253874 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.623196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.257291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCCT ACGAAGATCG AATTCGAGCG GTTGAGCTCT ATATCAAGCT GGGCAGGCGC
GTCAGGCCCA CGATCCGCCA GCTGGGTTAT CCAACAAAGA ATTCTCTGAA GGGCTGGTAC
AACGAATACC AGCAGAAGCT CGACTTGCCA GCGGGCTATG CGGGCCGGAG ACCCAAGTTC
TCGAAGGAAC AGAAGGCGGC AGCTATCGAG CATTACCTCG CTCACGACCG CTGCATTGCG
GCCACCATGA GGGCACTGGG CTACCCCTGC AGAGGGACGC TAACCGCTTG GATTCGCGAG
GCCCTTCCTG AAGCCAGAAG GCGTGTCGTC GGCAGTACGG TGCGACGAAG GTATTCCGGG
GAGCTGATGC AAGCAGGAGT CATGGAACTC TGCACTCGCG AGGAAAGTGC CCAGGCTGTA
GCCGACAAGT TCGGCGTGTG CCGGCCAACG CTGTACAACT GGAAGAACCA ACTTCTGGGA
CGTGAAGCAC CCGCATCCAT GAAACGTACC AATCCATCTT CGCCTTCGCA GGAGCGCGAT
GAGCTCGAGC GCCAGGTTGA GTCCCTGCGC CGCGAAGTCA GGCAACTGCG CCTCGAGCAG
GATCTTTTGA ACAAGGCCAA CGAACTGTTA AAAAAAGGCC TGGGCGTCGA CCTGCAGCTC
CTGTCCAACC GGGAGAAGAC ACTGCTGATT GACGCCCTCA GGGAGCACTA TGGCCTGCCA
GAGCTCCTTG CACAGTTGGA TCTTGCGCGC AGTTCGTATT TCTATCACCG GGCCCGCGCA
GCGGTGGGCG ACAAGTACCT GAAGGTTCGG CAATCCATCA CCGACATCTT TGAGTCGAAC
CACCGCTGCT ATGGCTACCG CAGGCTGCAG GCATCTCTGA CCAGGCAGGA CGTCACGATC
TCAGAGAAGG TTGTACAGCG GTTGATGAAG CAGGAAAGCC TGGTTGTTCC AAGGCCCAGA
AAGCGCCGCT ATGCGTCTTA CCTTGGCGAA ATCAGCCCAG CGCCTGAGAA CCTCATCGAT
CGCGACTTCC AGGCCGCGGT GCCCAACGCG AAATGGCTCA CGGACATCAC GGAGTTCCAG
ATCCCGGCTG GCAAGGTGTA CCTCTCGCCC ATCATCGACT GCTTCGACGG AATGGTCGTC
AGCTGGACCA TTGGGACCAG TCCGGACGCG GAGTTGGTCA ACACGATGCT GGACGCAGCC
ATCGAGACGT TGGCCGACAC GGCTGATCGT CCCGTGGTCC ACTCCGATCG GGGCGGCCAC
TACCGCTGGC CGGGTTGGCT CTCAAGAATG AGCAACGCGA ACTTCATCCG CTCGATGTCT
CGCAAAGCAT GCTCACCTGA TAACGCTGCC TGCGAAGGCT TCTTCGGTCG GCTGAAGAAT
GAGCTGTTCT ATCCTCGGGA CTGGAAGACC GCCACCATTG AGCAGTTCGT CGAGGCGGTC
GACTCGTACA TCCGCTGGTA CAACGAGAAG CGGATCAAGA TCGCACCCGT ATTCTTGTCA
GCGGTGACAG CGCAGGCGGC GGCCTCGCGG CGGCGCTGGC ATTGCTCGCG CGCGATAGGG
GTAAGTATGC GATCGCCTAC CAGCATCTGG TCTTCCCAAT GA
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| Protein sequence | MYSYEDRIRA VELYIKLGRR VRPTIRQLGY PTKNSLKGWY NEYQQKLDLP AGYAGRRPKF
SKEQKAAAIE HYLAHDRCIA ATMRALGYPC RGTLTAWIRE ALPEARRRVV GSTVRRRYSG
ELMQAGVMEL CTREESAQAV ADKFGVCRPT LYNWKNQLLG REAPASMKRT NPSSPSQERD
ELERQVESLR REVRQLRLEQ DLLNKANELL KKGLGVDLQL LSNREKTLLI DALREHYGLP
ELLAQLDLAR SSYFYHRARA AVGDKYLKVR QSITDIFESN HRCYGYRRLQ ASLTRQDVTI
SEKVVQRLMK QESLVVPRPR KRRYASYLGE ISPAPENLID RDFQAAVPNA KWLTDITEFQ
IPAGKVYLSP IIDCFDGMVV SWTIGTSPDA ELVNTMLDAA IETLADTADR PVVHSDRGGH
YRWPGWLSRM SNANFIRSMS RKACSPDNAA CEGFFGRLKN ELFYPRDWKT ATIEQFVEAV
DSYIRWYNEK RIKIAPVFLS AVTAQAAASR RRWHCSRAIG VSMRSPTSIW SSQ
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