| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3434 |
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| Symbol | |
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| ID | 5456688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3669939 |
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| End bp | 3670325 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640879023 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001414694 |
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| Protein GI | 154253870 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.838817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.246691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCATC ACATTGACAA GGTAAGGAAT ATTCCTTACC ATAGAGGCAT CTCTATCAGG
AGAACGGCCA TGCCTGTCAT TCATGAAGTT GCCACACTGA CCTCCAAGGG CCAGATCACT
CTGCCCAAGC CCATCCGGCA AGCGCTCGGT GTCGATGCCG GCGGCAAAGT CGCATTTGAC
CTGCGTGACG GCGAAGTCGT CGTGACCCGT GCCGACGCCG AGCACGAGGA CCCCGCCATC
GGTGCGTTTC TGAGCCTGCT GGCCCGCGAC ATCGAGGCTG GCCGGAACGT CCAAGGCCTG
CCCGAGGATC TGGCTCGCGC CATGCTGAAG CACGCGGGGC ACGGCGTGAA GCTGGACGAG
GAAATCGACG GGGAAGTGGC GCTCTGA
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| Protein sequence | MRHHIDKVRN IPYHRGISIR RTAMPVIHEV ATLTSKGQIT LPKPIRQALG VDAGGKVAFD
LRDGEVVVTR ADAEHEDPAI GAFLSLLARD IEAGRNVQGL PEDLARAMLK HAGHGVKLDE
EIDGEVAL
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