Gene Plav_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3427 
Symbol 
ID5456041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3664398 
End bp3664844 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID640879016 
Producthypothetical protein 
Protein accessionYP_001414687 
Protein GI154253863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.499762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAT CTTTTCCCAG GTCCGCTCCA AGCTGGCGAG CCCTTGGCCT GGCCGTTGTA 
CTGCCGGTGT CCTTGGGTGT CTTCAGTCCG GCCACATTCG CTGCCGATGT GCTGGTCATC
ACCGACAGCC GCCATCCGGT CAAGACCATG GGCGGCGAGC GGCTGATCGA GCTGGACGAA
GCGTACCGGA TTGAAGCGGA GCTTTCTGCG GAACTGCCCG CCGAACCCGA ACAGGCGACC
GCCCTCGTCA AGCGTCGGCT GAACAGCGGC GGCACCGACC TCCAACGCCG CATCGCTTCC
GCCTACCAGG GCGTTGCCGA CGCATGGAGC CTGGGCATCA CCAGCATCCC GGCCGTCGTG
GTGGATCAAC GCTACGTCGT CTATGGCGAA CCCGATGTGG CCCGCGCTGT CGCGCGCATC
GAGCAGCACC GGAGGGCCCA GCCGTGA
 
Protein sequence
MPASFPRSAP SWRALGLAVV LPVSLGVFSP ATFAADVLVI TDSRHPVKTM GGERLIELDE 
AYRIEAELSA ELPAEPEQAT ALVKRRLNSG GTDLQRRIAS AYQGVADAWS LGITSIPAVV
VDQRYVVYGE PDVARAVARI EQHRRAQP