Gene Plav_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3418 
Symbol 
ID5456798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3655693 
End bp3656052 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content65% 
IMG OID640879007 
Producthypothetical protein 
Protein accessionYP_001414678 
Protein GI154253854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.269524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0696032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACC GCATCCTCAC TTCCCGTTTT GCCCAGCGCG CCGCCGTGGC CCTGGGTGCA 
GCCGCGCTGC CTGCGCTGTC GTACGCGCAG GGTCTGCCGC AGTTGGAGAA CCCGACTCGC
GGCACGGGCA ACGGCATCAT GGAGACGATC CGCAACTACG GCTACGACAT CATCATGCTC
GTGGCCCTCC TGGTGGTGGC GTCGATGTTC ATCGGTGTCT GCTATCACGC CTACGGCACC
TACGCGGAGA TCCACACCGG CCGCAAGACC TGGGGCCAGT TCGGCCTCAC GGTCGCCATT
GGCGCCGTGC TGCTCGTGAT CGGCATCTGG CTGCTCACCG AAGCCACCGG CATCCTGTAA
 
Protein sequence
MHNRILTSRF AQRAAVALGA AALPALSYAQ GLPQLENPTR GTGNGIMETI RNYGYDIIML 
VALLVVASMF IGVCYHAYGT YAEIHTGRKT WGQFGLTVAI GAVLLVIGIW LLTEATGIL