Gene Plav_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3415 
Symbol 
ID5454184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3654215 
End bp3654964 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID640879004 
Producthypothetical protein 
Protein accessionYP_001414675 
Protein GI154253851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.194582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0633742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATG CCGCCTCGAC CGCGCAGCGG GAGCAGAACC AGCGCCAAGG TCTGATCGTC 
GGCACCATCA CCTTGCCGTT CCGGCTGCTC GGGGTGCTGA TCGGCTCGCT GCTGTTCTCC
ATCGTGGTGG AGTGCGTCGG CATGCACCTG TTCTGGAAGG AACAGGGCTG GCGCCATTCT
CAGCAGATGT TGCAGTACGA ACTGGGGCAC CTGTCCAATC ACTTCACGCG CAGCGTGGTC
GTGCAGGAGC CGGGGCGCAC GGCGCACGAG CTGGTGGATA CCGGCTACGA ATGGGTGTTC
GTGCGCTCGG GGCTGCTGGA ACGCATGAGT CAGACCGCTG AGCGCGCCCG CACGCCCAGC
CAGGGACAGA CGCGGAACTT TCGGTACTTC ATCAGCCAGG TCTATGTCTG GGCCGAGAGC
TACCTGATTG CCGCCGCGTT CACGACGTTG ACCTTTCTTG TGCGGCTGTT GGTTCTGGCG
CTCACGCTGC CCTTGATCTT CACGGCGGCA TTCGTCGGGC TGATCGACGG CTTGGTTCGG
CGTGACGTGC GTCGATTTGG CGCCGGGCGT GAATCGGGCT TCATCTACCA TCGTGCGAAA
GCCAGCCTGA TGCCGCTGGC CGTGCTGCCG TGGATCACCT ACCTGGCACT GCCGATCTCG
GTGCATCCGC TGCTGATCCT CCTGCCGAGT GCCGCCTTGC TGGGCTTGGC CGTGAGCCTG
ACCGCCGGCA GCTTCAAAAA GTATCTCTAG
 
Protein sequence
MKDAASTAQR EQNQRQGLIV GTITLPFRLL GVLIGSLLFS IVVECVGMHL FWKEQGWRHS 
QQMLQYELGH LSNHFTRSVV VQEPGRTAHE LVDTGYEWVF VRSGLLERMS QTAERARTPS
QGQTRNFRYF ISQVYVWAES YLIAAAFTTL TFLVRLLVLA LTLPLIFTAA FVGLIDGLVR
RDVRRFGAGR ESGFIYHRAK ASLMPLAVLP WITYLALPIS VHPLLILLPS AALLGLAVSL
TAGSFKKYL