Gene Plav_3413 details

Gene Information

• Locus tag: Plav_3413
• ID: 5454270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Parvibaculum lavamentivorans DS-1
• Kingdom: Bacteria
• Replicon accession: NC_009719
• Strand: +
• Start bp: 3651464
• End bp: 3652012
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640879002
• Product: hypothetical protein
• Protein accession: YP_001414673
• Protein GI: 154253849

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.17107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 45
• Fosmid unclonability p-value: 0.0884418
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGAAAT CCCATCTGGC CCATCTCACG TTCAAGGGCC TGCTCATGCT GCTGACGATC 
CTGCCGCTGG CCTCGCGTGC CGGCGTGCCG CTGATCGTGG TCGAGGACCG TGGCGGTGCA 
TCGGCGCTGC CGTACTACGA AGCACTCAAC CTCCAGCCGC GGGACAACGG TGCAGCGCGG 
TCGCCCATCC CGATGCCGCA GGTTCCCGCG ACACCCGCGG ATGAGGCTGC GATGCTGCCG 
GTGCGCAGCG CCAAGCTCAC GCCCGGCACC GTCGCGCGAC GGGTGATCGA GGCACCGGGC 
CTGCGGCCGT TCGTGGTCAT TGGCGACGAC AAGGCTTCCC GGGACTGGCT GCAGCGCCAT 
GCGGGCTCCT TGCACGAGCG CGGCGCGGTC GGCCTGGTGG TCAATGTCGA GACCGCACAA 
ACCTTGGCGC GGCTGCGCGC ACTGGCGCCC GGCGTGCCAC TGGCACCCGT GGCGGGCGAT 
GACCTGGCTG AGCGTCTGGG CTTGAGGCAC TACCCGGCGC TGATCACGGC CACCGGCATC 
GAGCAATGA 

 

Protein sequence

MTKSHLAHLT FKGLLMLLTI LPLASRAGVP LIVVEDRGGA SALPYYEALN LQPRDNGAAR 
SPIPMPQVPA TPADEAAMLP VRSAKLTPGT VARRVIEAPG LRPFVVIGDD KASRDWLQRH 
AGSLHERGAV GLVVNVETAQ TLARLRALAP GVPLAPVAGD DLAERLGLRH YPALITATGI 
EQ