| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3412 |
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| Symbol | |
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| ID | 5456516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3650877 |
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| End bp | 3651467 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640879001 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001414672 |
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| Protein GI | 154253848 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.17107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.120299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCGC CAACCCTGAC GGCGCCGCTG CGCGCACTGG TGGTCGCTGC TGGCCTGTAC
GTCAGCACCG TCTATGCCCA GGAGGTTCCG CCGCCGGCCT ACCAGCTTGC CGCCCAGCGC
GCGGGCATCC CTTCGACGGT GCTCTACGCC GTGGCCCTGC AAGAGAGCGG TATCCGACGC
AACGGGCGCA TCGTCCCGTG GCCTTGGTCC CTCAACGTCG CCGGCCAGTC GCGCCGCTAC
ACGACCCGAG CCGACGCCTG CGCGGGTTTG CAGCGGGCGA TGCGCTCGAC GCCTCATACG
CGCATCGACG CGGGCCTTGG GCAGATCAAC CTCGGCTACC ACCAGCAGCG CTACAGCACC
GCGTGCGACC TGCTTGACCC GTACCGCAAC CTCGCCATCG CCGCCGAGAT TCTGAAAGAA
CAGCACACCC CCGGTGAGGA CTGGCTGGTG GCGGTCGGCC GTTACCACCG CCCCGCGGGT
GGTGAGCCGG CCGCCCGCTA CCGGCGCAGC GTATCCCGCC ACCTCGCCCG CGTGCAGGGT
GCGCGCTCAA CCACTGCGGC GTCCGCCGCG CGCCAGGAGA CCTCCCCATG A
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| Protein sequence | MAAPTLTAPL RALVVAAGLY VSTVYAQEVP PPAYQLAAQR AGIPSTVLYA VALQESGIRR
NGRIVPWPWS LNVAGQSRRY TTRADACAGL QRAMRSTPHT RIDAGLGQIN LGYHQQRYST
ACDLLDPYRN LAIAAEILKE QHTPGEDWLV AVGRYHRPAG GEPAARYRRS VSRHLARVQG
ARSTTAASAA RQETSP
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