Gene Plav_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3409 
Symbol 
ID5456131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3648888 
End bp3649508 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID640878998 
Producthypothetical protein 
Protein accessionYP_001414669 
Protein GI154253845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0939204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.321633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAGG ACGCCGAGCT TATGTGCCCA ACTCCACCTT GGTTTCACCA TCCCGAACGC 
CGCCTGCTGG CGGGAGTCCT CGGCCTGCTC TGGTCGGTGC TGGCTGGCGG TTGCGCGACG
ACGACTGCGC CACCCGCGCC TGATGTCATC GAGGAAGTCT CGGCCGCACC CGAACCCGAG
ACGCCCGAGT ACATCCCCGT TGTGCGTTAC GGTCGCTACA CGCTAGTCGA GCTAGCACCC
CCGGCTGCAC AGCGGGACCT GCTGTTGCAG ACCATCGACG TGTCCATGCC CGAAGATGCC
CGCGCCACCG TCGGCGATGG GCTGCGGCAT GTGCTCAAGC GCAGTGGTTA CGGCCTGTGC
CAGACGGCGC ACGCGGTGAC CGAGCTGTAT GCCCTGCCGC TGCCGGCGGC GCACCTGCAC
CTCGGCCCCA TGACCTTACG CGATGCGCTG CTCACACTGG CTGGCCCGGC TTGGGAACTG
CACGCGGATG ATCGCGCACG ACAGATTTGC TTCGAACGGC CCGCCGACAG CGCGGCTATC
GAACCTGCAT CCGAGCCATC CGCCGCCGAC GCGGTGCAGA CGTTCCCGGT GGAGCCTTCG
GTTTCGGGAG GCCAGCTATG A
 
Protein sequence
MFQDAELMCP TPPWFHHPER RLLAGVLGLL WSVLAGGCAT TTAPPAPDVI EEVSAAPEPE 
TPEYIPVVRY GRYTLVELAP PAAQRDLLLQ TIDVSMPEDA RATVGDGLRH VLKRSGYGLC
QTAHAVTELY ALPLPAAHLH LGPMTLRDAL LTLAGPAWEL HADDRARQIC FERPADSAAI
EPASEPSAAD AVQTFPVEPS VSGGQL