| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3405 |
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| Symbol | |
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| ID | 5454869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3641831 |
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| End bp | 3644110 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878994 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001414665 |
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| Protein GI | 154253841 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.342787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG ATCTTGAATC TACTGCCGCA GAAGCCACTC CCGTGCAGGG TGAACTGCTC
GACGCGGCAC CTTCTCCTCT GACCCTGAGC CTTCAGGATT TCGTCGGTGA GTTCGGCGAC
GAATTGCTGG ACTCTCTCAA TCGGGCTAAC CCGCCGGTCT ATACCGGCCA GCCACAGGCG
CACCGCCAGC TCATCGTCGC CAGCCTCAAA CGCAAGCTGT TTGAGGCCCA GGCCGAAGTC
GTCTATGCCG CCGCCGAGCT GCTGGTCGAT CGTGGCGAAC GCGCCGCGAT CGTTAATGGC
GAGATGGGGT GCGGCAAGAC GACCGTCGGC ATCGCCACGG CCGCCGTCCT CAACGCCGAA
GGCTACCGCC GCACCCTGGT GCTTTCGCCG CCACACCTGG TTTACAAGTG GCGACGCGAG
ATCCAGGAGA CGGTGACGGG CGCCAAGGTC TGGGTCCTCA ATGGTCCGGA TACCCTCGTC
AAACTTATCA GGCTGCGCGA GCAGTTGGGT GTGCAGCCCA CGGGCCAGGA GTTCTATGTC
CTGGGGCGCG TCAGGATGCG GATGGGGTTC CATTGGAAGC CTGTCTTCAC CCGGCGGCGC
ACCCGCCACG GAGACGTGGC GGCCTGCCCG GACTGCGGCA CTGTCATCAC CGACCTTGAC
GGCGAGCCGG TCAACCCGAT CGCACTCGAA GCCGAGGAGT ACCGCAGGAA GTGCAGCCAT
TGCGCCGCGC CCTTGTGGAC GCTGATCCGT CCGAGAAGCC TGTCCGGCAG TGACCAGTCC
TCGGCTGTCC TCAAAGCCTT GAAGCGCATC CCGACCATCG GGGAAGTCAC CGCGCAGAGG
CTGATGCAGA AGTTCGGTGA TGGCTTCCTG GCCTCGATGC TGGGCGACAA CATCCATGAG
TTCATCAACC TCATGGATGG CAGCGGCGAG CTGGTGTTTT CCGACCGTCA GGCCACGCGC
ATGGAACGTG CGATGGCCAA CATGGAGTTC GGCTTCGGCG AGGGCGGCTA CCAGCCGTCC
GAGTTCATCA AGCGCTACCT ACCGCAAGGC ACGTTCGACC TGCTCATCGC CGACGAGGCA
CACGAGTACA AGAACGGCGG AAGCGCCCAG GGCCAGGCCA TGGGCGTGTT GGCGGCGAAG
GCTCGCAAGA CCTTGCTGCT GACCGGCACG CTGATGGGCG GCTACGGCGA CGACCTGTTC
TACCTGCTGT TCCGAGCCCT ACCCGGGCGA ATGATCGAAG ACGGCTACCG CCCGACCACG
AGCGGCAGCA TGACCTCGGC CTCGATGGCG TTCATGCGCG ATCACGGTGT CCTCAAGGAC
ATCTATTCCG AGAGCACTGG CACGGCGCAC AAGACCGCGA AAGGCACGAA AGTCAGTGTC
AGAACGGTCA AGGCTCCGGG CTTCGGCCCC AAGGGCGTGT TGCGTTGCAT CCTGCCGTTC
ACGATCTTTC TCAAGCTCAA GGACATCGGC GGCAACGTCC TGCCGCCGTA TGACGAGGAG
TTCCGTGAAG TCGCGATGGA CACGGCGCAA GCCGCGGCCT ACCGCGATCT GGCGGGTCGG
CTCACCGCGG AGCTGAAACA GGCTCTGGCG CGACGCGATA CGACCTTGCT GGGCGTGGTC
CTCAACGTGC TGCTGGCCTG GCCGGATTGC TGCTTCCGGT CGGAGACCGT GGTGCATCCG
CGCACGCGCA ACACCTTGGC GTTCGTCCCG GCTCAGTTCT CTGAGTTCGA GCTGACGCCG
AAAGAGCGCG AGCTGATCGA CGTCTGCAAA GAGGAGAAGG CGCAGGGCCG CAAGGTTCTG
GCCTATACGG TCTATACCGG CACGCGCGAC ACCACGTCGC GCCTGAAGGT GCTGCTGGAG
CAGGAAGGCT TCAAAGTGGC GGTACTGCGC GCAAGCGTGG ATGCCAGCCG CCGCGAGGAC
TGGATCGCCG AGCAGTTGGA CCGTGGCATC GACGTGCTCA TCACCAACCC CGAACTCGTC
AAGACGGGAT TGGACCTGTT GGAGTTTCCG ACGATCGTGT TCATGCAGTC GGGCTACAAC
GTGTACTCGC TCCAACAGGC GGCACGCCGC TCCTGGCGCA TCGGGCAGAA ACAGCCTGTG
CGCGTGATCT ACCTCGGCTA CGCCGGCTCC TCGCAGATGA CCTGCCTTGA GTTGATGGCC
AAGAAGATCA TGGTCTCGCA GTCCACCTCG GGCGATGTGC CCGAATCCGG GCTCGATGTC
CTGAACCAGG ATGGTGATTC CGTCGAGGTT GCACTGGCCC GGCAACTGGT AACCGCCTGA
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| Protein sequence | MSLDLESTAA EATPVQGELL DAAPSPLTLS LQDFVGEFGD ELLDSLNRAN PPVYTGQPQA
HRQLIVASLK RKLFEAQAEV VYAAAELLVD RGERAAIVNG EMGCGKTTVG IATAAVLNAE
GYRRTLVLSP PHLVYKWRRE IQETVTGAKV WVLNGPDTLV KLIRLREQLG VQPTGQEFYV
LGRVRMRMGF HWKPVFTRRR TRHGDVAACP DCGTVITDLD GEPVNPIALE AEEYRRKCSH
CAAPLWTLIR PRSLSGSDQS SAVLKALKRI PTIGEVTAQR LMQKFGDGFL ASMLGDNIHE
FINLMDGSGE LVFSDRQATR MERAMANMEF GFGEGGYQPS EFIKRYLPQG TFDLLIADEA
HEYKNGGSAQ GQAMGVLAAK ARKTLLLTGT LMGGYGDDLF YLLFRALPGR MIEDGYRPTT
SGSMTSASMA FMRDHGVLKD IYSESTGTAH KTAKGTKVSV RTVKAPGFGP KGVLRCILPF
TIFLKLKDIG GNVLPPYDEE FREVAMDTAQ AAAYRDLAGR LTAELKQALA RRDTTLLGVV
LNVLLAWPDC CFRSETVVHP RTRNTLAFVP AQFSEFELTP KERELIDVCK EEKAQGRKVL
AYTVYTGTRD TTSRLKVLLE QEGFKVAVLR ASVDASRRED WIAEQLDRGI DVLITNPELV
KTGLDLLEFP TIVFMQSGYN VYSLQQAARR SWRIGQKQPV RVIYLGYAGS SQMTCLELMA
KKIMVSQSTS GDVPESGLDV LNQDGDSVEV ALARQLVTA
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