Gene Plav_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3404 
Symbol 
ID5456752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3640618 
End bp3641727 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content65% 
IMG OID640878993 
Producthypothetical protein 
Protein accessionYP_001414664 
Protein GI154253840 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.535281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TGTTCCCGCG GCTCGCCCGC AATTTCGCCA AGAACGGTTA CTACCCGACC 
GACGAACCCA CGCTCGAAAG AGCCCTCAAC GCACTGATGC CCAGCGACGG GACGATGTGC
ATCCTCGATC CCTGCGCCGG CGAAGGCGTG GCTGTCGCCG AAGCCGCCCA TGCCCTCGGG
CGCGAGCAGA CCAAGGCGTT CGCCGTCGAG TTCGACGCGG AGCGGGCACG CCATGCCCGC
GGCCTCGTCG ATCATTGCCT GCACGCGGAC CTGATGGACA CAATGGTCTC CAAGCAGTCG
TTCGGACTGC TCTGGCTCAA CCCGCCGTAT GGCGACCTAT CCAAGGATGT CAATGGCAAC
ATCGGCTATC AAGGCCAGGG CCGTGCCCGC CTCGAAAAGC TGTTCTACCA ACGCACCCTG
TCGCTGCTGC AGTACGGCGG CGTGCTGGTC TTCATCGTCC CCGGCTACGT GCTCGACGCG
GAGCTGGTCG GCTGGCTGAC ACGCCACTAC ACCGATTTGC GGATCTACCG AGCGGTGGAG
ACGCAGTTCA AGCAGGTGGT GATCTTCGGC CGCAGGGCAC GCCAGCGCGA GCAGGCCCTC
GATGGCGTCA AGGCCATGCG CAATCTGCTG CTGCAGGTGG GGCTTGGCGA AGTCGAAGCC
GAGGAACTGC CGAGCGATTG GCCGTTCCTG CCGTACATCG TCCCCGCCAC TCCGGCCGAG
CCGGAGCATT TCTTTCGCGT GACGATGGAG CCCGAGCAGT TCGCCGACGA AGTTGGCCGG
TTGCAAGGCC TCTGGCCGTC GCTGGACACG CACCTGGGGG CCGCGCAGCA GTCGCTGCGT
CCACCGGCGC GTGCTCTTTC CCACTGGCAT CTTGCCCTGG CGTTGGCCGC GGGTGCGATC
TCCGGCGTGG TGCGCTCCAA GACCGGGCGT GTGCTTGTCG TCAAGGGGGA CACCCACAAG
GACAAGACGC TCCAGCGGGA ATTCACCGAA CGCGACGATG GCTCCATCGC CGAGACCCGC
ATCTTCACCG ACAAGTTCGT TCCCGTCATC CGCGCGTGGG ACATGACGCC TGGCTCCCCA
ACTCGGGGCG AGGTGTTGAC CATTCGCTGA
 
Protein sequence
MARMFPRLAR NFAKNGYYPT DEPTLERALN ALMPSDGTMC ILDPCAGEGV AVAEAAHALG 
REQTKAFAVE FDAERARHAR GLVDHCLHAD LMDTMVSKQS FGLLWLNPPY GDLSKDVNGN
IGYQGQGRAR LEKLFYQRTL SLLQYGGVLV FIVPGYVLDA ELVGWLTRHY TDLRIYRAVE
TQFKQVVIFG RRARQREQAL DGVKAMRNLL LQVGLGEVEA EELPSDWPFL PYIVPATPAE
PEHFFRVTME PEQFADEVGR LQGLWPSLDT HLGAAQQSLR PPARALSHWH LALALAAGAI
SGVVRSKTGR VLVVKGDTHK DKTLQREFTE RDDGSIAETR IFTDKFVPVI RAWDMTPGSP
TRGEVLTIR