Gene Plav_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3402 
Symbol 
ID5456812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3639457 
End bp3639798 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content57% 
IMG OID640878991 
Producthypothetical protein 
Protein accessionYP_001414662 
Protein GI154253838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.525488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGC ACTACTTCGA CACCGTTCAC AAGGGCTTTC CCATCACCGT CGTACTGGGC 
TGGGACCGGC CGGCAAATTA CTTCTTCCTA TTCATCGAAA AGCCGGCCGA GCTGATCGAC
GATACCGCGA AGGTCGAGAG CGACGACTTC TTGTACAGCA ACCTGCACGA GAGCGACCCG
TTCAACCACT ACCTGGACTA CTACCGAGTG GTCCTGCGCC ATTTCCACAT CGACGTGCCC
GAAAGCATGT TCACCGAAGT CCAACAGGAC TGCGAGGGCA ACGTTGGCAA CCGTGTAGTC
AAGCATCAGG CCGACGGCTC GTTCACCGAA CAGACGTTCT GA
 
Protein sequence
MSRHYFDTVH KGFPITVVLG WDRPANYFFL FIEKPAELID DTAKVESDDF LYSNLHESDP 
FNHYLDYYRV VLRHFHIDVP ESMFTEVQQD CEGNVGNRVV KHQADGSFTE QTF