Gene Plav_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3389 
Symbol 
ID5455376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3628450 
End bp3628848 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID640878978 
ProductMerR family transcriptional regulator 
Protein accessionYP_001414649 
Protein GI154253825 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.462896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.11439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGA TCGGTGAACT GGGCAAGAAG GCAGATTGCT TGGTGCAGAC CGTGCGCTTT 
TACGAGTCAG AAGGCTTGCT GCCCGAGCCT GCACGTAGCG AGGGCAACTT CAGGCTCTAT
GACGAAGTCC ATTTGCAGCG CTTGCTGTTC ATCCGCCGCT GCCGGGCGAA GGACATGACG
CTGGATGAGA TCCGTCAACT GCTGAACTTA CGGGATCGGC CAGAGTTGGG CTGCGGCGAG
GTGAACGCGC TGGTCGACGC TCATATCGCG CAAGTGCGGA CCAAGATGAA GGAATTGCGC
GCCTTGGAGC GCGAGTTAAT GGATCTGCGA CGCTCCTGCG ATAGCGCCCG AACCTCGCGC
GAGTGCGGCA TTCTCAACAG CTTGGCCGAG CCCGCCTGA
 
Protein sequence
MMRIGELGKK ADCLVQTVRF YESEGLLPEP ARSEGNFRLY DEVHLQRLLF IRRCRAKDMT 
LDEIRQLLNL RDRPELGCGE VNALVDAHIA QVRTKMKELR ALERELMDLR RSCDSARTSR
ECGILNSLAE PA