Gene Plav_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3382 
Symbol 
ID5453639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3621869 
End bp3622657 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640878972 
Producthypothetical protein 
Protein accessionYP_001414643 
Protein GI154253819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.0754853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA ACGAACCTCT GCAACTCAAT CTCGGCTCTT TGCGCAGCGC GATGTCGCTG 
ACGCTTCACA CCCACCACGC CTCGCGCATC TGGCATGGCC GCGCCGCCGC CGAGGGGCGA
CCCGGCATCG TCGGCCTGAA CGGCTACATC GCCGTGATGA ACAAGATGAA GCGCGGCTCG
GAGCAGGACG ACCCGTACAG CGACTGGTGG ATGTTGCGCA TCGAGGAAAA GCTCGACCAG
ACCAGGACCA CGTTGCAATC GCTGCGCGAG CAGGTTGACC AGGCACTGGC CGGCGTGCCT
GCGGCGTTGA GCCTGGGTGA GAACCTCAAC GTGCAGCCGG TGAAGCTCCC CTTGTTCGTG
AACGCGCAGC TCGGCTTTGC CGCCGTCTAT CTGCTGGCCG ACTACGACGA CATCGCCCGC
AAGCTGATCC TCGCCCACCA CACCGCGCTG ATCGATCGCT CGACGTTGGA GCGCTGGCTC
AACGAAGGTG CCCACGCGCT GCGCAGCCTG TTCAGCCTGG CCCAGCAATA CCGCTACTCG
GGCTGCACCC GCGACGACTT CGCGGCCAAG AACGCCGCAG CTCGGGCAGC ATTGGAGAAG
TTCGGCGAAC TGCCGCAGGA CGTGCTCGAA GGCATGCGCC GCTCGAAGTT TGCGCCGCCC
GTCGTGCGCC GTGGTCTGCA ACAGCGTGGT GATAGCGCTG CCGCAGCCGC ATCTCCCACC
GACGAAGGCG CTGCCGCCGA TTCGGCCGAG GCCAAGTCCA CAGCCGCCGG CGAGGACGAA
CCGGCATGA
 
Protein sequence
MATNEPLQLN LGSLRSAMSL TLHTHHASRI WHGRAAAEGR PGIVGLNGYI AVMNKMKRGS 
EQDDPYSDWW MLRIEEKLDQ TRTTLQSLRE QVDQALAGVP AALSLGENLN VQPVKLPLFV
NAQLGFAAVY LLADYDDIAR KLILAHHTAL IDRSTLERWL NEGAHALRSL FSLAQQYRYS
GCTRDDFAAK NAAARAALEK FGELPQDVLE GMRRSKFAPP VVRRGLQQRG DSAAAAASPT
DEGAAADSAE AKSTAAGEDE PA