| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3376 |
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| Symbol | |
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| ID | 5456381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3616676 |
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| End bp | 3616888 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878966 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001414637 |
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| Protein GI | 154253813 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.658853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.605571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCAAG TACCTGTACT GCCACCGCAC GAGCGCCGCA TCCTGCGGCT CGATGAAGTT
GAAGCGAAGT CCGGCTTCAA ACGCGCCCAC ATCTACAACC TGATGAAGAA GCGCCAGTTT
CCACAGGCGT TGCGCCTTGG CGTGCGCGCG GTGGGCTGGG ATTCGGTCGA GATCGATCAG
TGGATCGCCG AACGCCTTAA CAACCGCACC TGA
|
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| Protein sequence | MSQVPVLPPH ERRILRLDEV EAKSGFKRAH IYNLMKKRQF PQALRLGVRA VGWDSVEIDQ
WIAERLNNRT
|
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