| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3369 |
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| Symbol | |
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| ID | 5454903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3608183 |
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| End bp | 3611365 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878959 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001414630 |
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| Protein GI | 154253806 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.957207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCTG CAATCGTCTC CTTCTGCGTC AGGCACCGCT GGCTGGTGCT GCTGACGGTC
GCCTTCGTCG CGGGCTTCGG CGCCTATAAT TTCACGCGCC TGCCGATCGA CGCCGTGCCG
GACATCACCA ATGTCCAGGT GCAGATCAAC ACCTCCGCGC CCGGCTATTC TCCCGTCGAG
GTGGAGCAGC GCATCACCTT TCCGCTGGAA ACGGCGATGG GCGGCCTGCC CGGCCTCGAC
TACACGCGCT CGCTTTCGCG CTACGGCCTG TCGCAGGTCA CGGTCGTCTT CGTGGACGGC
ACGGACATCT ACCGCGCGCG GCAGTTGATT GGCGAACGTA TTCAGGCCGT TTCCGGCGAG
TTGCCGCCCG ACGTCGAAAC GGCCATGGGC CCGGTTTCGA CCGGCCTCGG CGAAATCTAC
ATGTACCGCA TGGAGGCCGC TCCGGATGCG CGCAATGCTG AAGGCGTGCC CTATACGCTC
TCGGACCTGC GCGCGATCCA TGACTGGATG GTGCGTCCGC AACTGCGCAC CGTTCCGGGC
GTGGTCGAGG TAAATGCCAT CGGCGGTTAT GAGCGGCAGA TCCATGTCGT GCCCGACCCT
TACCGGCTCA CCTCCTTCAA TCTCTCCTTC GCCGATGTCG CGAAGGCGCT CGAGGACAAC
AACGTCAATC AGGGCGCGGG CTATATCGAG CGGAACGGAG AGCAATATCT GATCCGCCTG
CCGGGCCAGC TTGGCGATGC GGCGGAGTTC GGCGAGGTGC TGCTCGGCAC GCATAATGGC
AGGCCAATCT ATATCCACGA TGTCGCGGAA GTGACCTTCG GCAAGGAGCT CCGCACCGGC
GCGGCGACGC ATGACGGCGA GGAAACCGTT CTCGGCACCG CTGTGATGCT GATGGGCGAG
AACAGCCGCG AAGTGGCAAG CGCCGTTCGC GGCAAGCTGA AGCAGATCGA GCGAAACCTG
CCCGACGGCG TGACAATCGA AACGCTCTAC GACCGCACCG ATCTCGTCCA GAAGACCATC
GCCACCGTCC GTAACAATCT CGTGGAAGGC GCGGTGCTCG TCATCGTTGT CCTTTTCATG
CTGTTGCGAA GTATCCGGGC GGCGCTCATC ACCGCCGCTG TCATTCCGCT TTCCATGCTG
ATCGCGGTGA CGGGCATGGT GGAGTACCGC ATCAGCGCCA ACCTGATGAG CCTCGGCGCC
ATCGACTTCG GCCTGATCGT GGATGGCGCC GTCATCATCA CAGAGAATTG CTTGAGACGT
CTTTCCGAAG AACGGAAGCA TCTGGGGCGC ACACTCGGCC TCGACGAACG CTTCGCTGTG
GTGGTGGACG CGACGCGCGA GGTGATAACG CCGGCCATGT TCGGCTCCTT CATCATCACG
GTCGTCTATC TGCCGATCCT CACATTGACC GGCGTGGAAG GAAAAATGTT CACGCCTATG
GCGGTCACGG TCGTCCTCGC GCTTCTCGGG GCAATGGCGC TGGCGGTCAC TTTCGTTCCG
GCGGCCATCG CCATTTTCGT GCGCGGCGAT GTGGAGGAGA AGGAGAGCCT CATCATGCGC
TGGGCGCAGA AGGGTTACCA GCCAGCACTT CGCTTCGCGC TTGGCCGTCA GAAGACAATC
GCCATCGCGG CGGCGGCGCT CGTGCTCGTG GCCGCGCTCG GCGCGACGCG CTTCGGCACC
GAGTTCATCC CGAGGCTCGA CGAGGGCGAC GTTGCGGTGC AGGTGCTCCG CATGCCGGGC
ACGAGCCTTA CGCAATCGGT GGAGATGCAG AAACAGGTCG AAAGGGCACT GATCGAGCTT
CCCGAAGTGC GGGAGGTCTT CGCAAGGACG GGCACGGCGG AAGTTGCAAC CGACCCTATG
CCGCCCAGCA TCTCGGACGC CTATGTGATG ATCGAACCGC GCTCCTCCTG GCCGAACCCG
CGCAAGCGGA AAGCCGAGCT TCTGCAGGAG ATAGACGAGA AGCTCGCCGC CATACCGGGA
GCGAATTACG AGGTCTCGCA GCCCATCGAG CTCCGCTTCA ACGAGCTCAT CTCGGGCGTC
CGTTCGGATG TCGGCATCAA GATATTCGGC GACGATATGG ACAAGCTCCT CGCCTCTGCG
AACGAGGTGG CCGCTATCGT TCAACGGATC GAAGGCGCGA CCGACGTGCA GGTGGAGCAG
GTGGAGGGGC TTCCCGTCCT CTCCATCGAG GTGAAGCGCG ATGTGGCGGC CCGCTTCGGG
CTCTCCGTCG CGGAGATACA GACGGTCGTG CAGGCGGCGA TAGGCGGCGC GCGGGCAGGT
ACCTTTTATG AAGGAGATTG GCGTACGCCC GTTTTCGTGC GCCTGCCTGA GACACTCCGG
CAGGATATGG ACCGCCTGCG GGAACTGCCG ATTCCGCTAC CGCCGGCACA TGAAGCGGAG
GACCGTTTCG CGCCTGCCTC CTATTCACCC TTCGGCGAAG GCATGCCGCG CGTCGTACCG
CTCCGCGAGG TGGCGGAGAT CGCCCTCGCG CCCGGACCGA ACCAGATCAG CCGCGAGAAC
GGCAAGCGGC GGATCACGGT GACGGCCAAT ATCCGCGAGC GCGACCTCGG CTCCTTCGTG
GACGAGGCGC GGGCTGCCGT GGCGGCGCAG GTGCAATTGC CGCCCGGCTA CTGGTTCGAA
TGGGGCGGGC AGTTCGAGCA GCTCGTCTCG GCGGCGAAGC GGCTTTCCAT CGTCGTGCCC
GCAGCGCTGG TGCTGATCTT CGCTTTGCTC TTCGCGAGCC TCGGCACGGC GAGGGACGCG
CTGCTCGTTT TCTCGGGCGT ACCGCTCGCG CTCACGGGCG GGCTCGCGGC GCTGGCGCTT
CGGGGCATGC CGCTCTCGAT CTCGGCAGGC GTCGGCTTCA TCGCGCTCTC GGGCGTCGCG
GTGCTGAACG GCCTCGTCAT CATCAGCTTC ATCAAGAACC TGCGGGCGCG GGGTCTTCCC
CTCGATGAAG CGATCCGGCA GGGGGCCATG ACGCGGCTCC GCCCGGTGCT GATGACGGCG
CTCGTTGCCT CGCTCGGCTT CGTGCCTATG GCGCTGGCGA CAAGCGCGGG CGCGGAGGTG
CAGCGCCCGC TCGCCACGGT GGTGATCGGC GGCATCCTGT CCTCCACCAT CCTCACGCTG
CTCGTGCTGC CCGCGATCTA CCGCCTCGCC CATGCGCGGG ACGAAGAAGA ACGAGCAGCC
TGA
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| Protein sequence | MIPAIVSFCV RHRWLVLLTV AFVAGFGAYN FTRLPIDAVP DITNVQVQIN TSAPGYSPVE
VEQRITFPLE TAMGGLPGLD YTRSLSRYGL SQVTVVFVDG TDIYRARQLI GERIQAVSGE
LPPDVETAMG PVSTGLGEIY MYRMEAAPDA RNAEGVPYTL SDLRAIHDWM VRPQLRTVPG
VVEVNAIGGY ERQIHVVPDP YRLTSFNLSF ADVAKALEDN NVNQGAGYIE RNGEQYLIRL
PGQLGDAAEF GEVLLGTHNG RPIYIHDVAE VTFGKELRTG AATHDGEETV LGTAVMLMGE
NSREVASAVR GKLKQIERNL PDGVTIETLY DRTDLVQKTI ATVRNNLVEG AVLVIVVLFM
LLRSIRAALI TAAVIPLSML IAVTGMVEYR ISANLMSLGA IDFGLIVDGA VIITENCLRR
LSEERKHLGR TLGLDERFAV VVDATREVIT PAMFGSFIIT VVYLPILTLT GVEGKMFTPM
AVTVVLALLG AMALAVTFVP AAIAIFVRGD VEEKESLIMR WAQKGYQPAL RFALGRQKTI
AIAAAALVLV AALGATRFGT EFIPRLDEGD VAVQVLRMPG TSLTQSVEMQ KQVERALIEL
PEVREVFART GTAEVATDPM PPSISDAYVM IEPRSSWPNP RKRKAELLQE IDEKLAAIPG
ANYEVSQPIE LRFNELISGV RSDVGIKIFG DDMDKLLASA NEVAAIVQRI EGATDVQVEQ
VEGLPVLSIE VKRDVAARFG LSVAEIQTVV QAAIGGARAG TFYEGDWRTP VFVRLPETLR
QDMDRLRELP IPLPPAHEAE DRFAPASYSP FGEGMPRVVP LREVAEIALA PGPNQISREN
GKRRITVTAN IRERDLGSFV DEARAAVAAQ VQLPPGYWFE WGGQFEQLVS AAKRLSIVVP
AALVLIFALL FASLGTARDA LLVFSGVPLA LTGGLAALAL RGMPLSISAG VGFIALSGVA
VLNGLVIISF IKNLRARGLP LDEAIRQGAM TRLRPVLMTA LVASLGFVPM ALATSAGAEV
QRPLATVVIG GILSSTILTL LVLPAIYRLA HARDEEERAA
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